Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 AL355001.2-201ENST00000620617 1191 ntBASIC19.59■□□□□ 0.73
TRIM2Q9C040 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM2Q9C040 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM2Q9C040 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM2Q9C040 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM2Q9C040 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.58■□□□□ 0.73
TRIM2Q9C040 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.58■□□□□ 0.73
TRIM2Q9C040 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRIM2Q9C040 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM2Q9C040 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.58■□□□□ 0.72
TRIM2Q9C040 AC233992.3-201ENST00000607491 485 ntBASIC19.58■□□□□ 0.72
TRIM2Q9C040 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM2Q9C040 AP004607.7-201ENST00000527152 1677 ntBASIC19.58■□□□□ 0.72
TRIM2Q9C040 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM2Q9C040 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM2Q9C040 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM2Q9C040 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM2Q9C040 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM2Q9C040 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM2Q9C040 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRIM2Q9C040 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRIM2Q9C040 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM2Q9C040 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 AC026471.6-201ENST00000622954 1905 ntBASIC19.56■□□□□ 0.72
TRIM2Q9C040 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM2Q9C040 AC026310.3-201ENST00000625186 2373 ntBASIC19.56■□□□□ 0.72
TRIM2Q9C040 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM2Q9C040 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM2Q9C040 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM2Q9C040 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM2Q9C040 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM2Q9C040 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM2Q9C040 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM2Q9C040 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM2Q9C040 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 ZNRF2P3-201ENST00000424200 374 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms