Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCGF1Q9BSM1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 KRT18P14-201ENST00000534205 1250 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L2-201ENST00000561772 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L6-201ENST00000626483 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L1-201ENST00000627662 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L8-201ENST00000629013 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L3-201ENST00000630187 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L7-201ENST00000630678 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 DUX4L5-201ENST00000630834 1275 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 AC242852.2-201ENST00000615738 1807 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 ECEL1P1-201ENST00000373592 1742 ntBASIC17.81■□□□□ 0.44
PCGF1Q9BSM1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 SMUG1P1-201ENST00000590640 811 ntBASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 BX005040.4-201ENST00000637145 1518 ntBASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCGF1Q9BSM1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 AC087742.1-201ENST00000575880 1738 ntBASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 KRT18P5-201ENST00000436075 1291 ntBASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF1Q9BSM1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 TERF1P2-201ENST00000583350 1212 ntBASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF1Q9BSM1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms