Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.61■□□□□ 0.25
TRGV9Q99603 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV9Q99603 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRGV9Q99603 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV9Q99603 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV9Q99603 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV9Q99603 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRGV9Q99603 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV9Q99603 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRGV9Q99603 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV9Q99603 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.6■□□□□ 0.25
TRGV9Q99603 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV9Q99603 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV9Q99603 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV9Q99603 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV9Q99603 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV9Q99603 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV9Q99603 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRGV9Q99603 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRGV9Q99603 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV9Q99603 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV9Q99603 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV9Q99603 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.59■□□□□ 0.25
TRGV9Q99603 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV9Q99603 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRGV9Q99603 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV9Q99603 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV9Q99603 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.58■□□□□ 0.25
TRGV9Q99603 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.58■□□□□ 0.25
TRGV9Q99603 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV9Q99603 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV9Q99603 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.58■□□□□ 0.24
TRGV9Q99603 AP005435.1-201ENST00000529293 1178 ntBASIC16.58■□□□□ 0.24
TRGV9Q99603 DUX4L19-201ENST00000557448 1267 ntBASIC16.58■□□□□ 0.24
TRGV9Q99603 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.58■□□□□ 0.24
TRGV9Q99603 AL512631.2-201ENST00000604634 923 ntBASIC16.58■□□□□ 0.24
TRGV9Q99603 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
TRGV9Q99603 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV9Q99603 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 AP004607.7-201ENST00000527152 1677 ntBASIC16.58■□□□□ 0.24
TRGV9Q99603 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRGV9Q99603 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV9Q99603 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRGV9Q99603 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV9Q99603 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV9Q99603 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV9Q99603 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV9Q99603 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV9Q99603 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRGV9Q99603 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRGV9Q99603 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV9Q99603 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRGV9Q99603 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV9Q99603 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV9Q99603 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV9Q99603 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 SYT6-210ENST00000641643 1587 ntBASIC16.56■□□□□ 0.24
TRGV9Q99603 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRGV9Q99603 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV9Q99603 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms