Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H4Q96RI1 AC131274.2-201ENST00000580697 1507 ntBASIC20.07■□□□□ 0.8
NR1H4Q96RI1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 GPX1-201ENST00000419349 1106 ntBASIC20.06■□□□□ 0.8
NR1H4Q96RI1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H4Q96RI1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H4Q96RI1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.04■□□□□ 0.8
NR1H4Q96RI1 MIR4449-201ENST00000578365 66 ntBASIC20.04■□□□□ 0.8
NR1H4Q96RI1 AC007029.1-201ENST00000604183 313 ntBASIC20.04■□□□□ 0.8
NR1H4Q96RI1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H4Q96RI1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 LINC01960-201ENST00000563759 1884 ntBASIC20.03■□□□□ 0.8
NR1H4Q96RI1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NR1H4Q96RI1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H4Q96RI1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NR1H4Q96RI1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms