Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPG11Q96JI7 LINC01960-201ENST00000563759 1884 ntBASIC18.21■□□□□ 0.5
SPG11Q96JI7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SPG11Q96JI7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.2■□□□□ 0.5
SPG11Q96JI7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.2■□□□□ 0.5
SPG11Q96JI7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.2■□□□□ 0.5
SPG11Q96JI7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SPG11Q96JI7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPG11Q96JI7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.2■□□□□ 0.5
SPG11Q96JI7 AC020928.2-201ENST00000588717 2197 ntBASIC18.2■□□□□ 0.5
SPG11Q96JI7 AL139125.2-201ENST00000623134 1869 ntBASIC18.19■□□□□ 0.5
SPG11Q96JI7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 AP003097.1-201ENST00000530657 1135 ntBASIC18.19■□□□□ 0.5
SPG11Q96JI7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 AC097658.1-201ENST00000475555 843 ntBASIC18.19■□□□□ 0.5
SPG11Q96JI7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.19■□□□□ 0.5
SPG11Q96JI7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPG11Q96JI7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 AC093787.1-201ENST00000450396 207 ntBASIC18.18■□□□□ 0.5
SPG11Q96JI7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPG11Q96JI7 LINC01124-201ENST00000409786 2117 ntBASIC18.18■□□□□ 0.5
SPG11Q96JI7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.18■□□□□ 0.5
SPG11Q96JI7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPG11Q96JI7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPG11Q96JI7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPG11Q96JI7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.17■□□□□ 0.5
SPG11Q96JI7 AC073912.3-201ENST00000624414 853 ntBASIC18.17■□□□□ 0.5
SPG11Q96JI7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPG11Q96JI7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPG11Q96JI7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.16■□□□□ 0.5
SPG11Q96JI7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPG11Q96JI7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SPG11Q96JI7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPG11Q96JI7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPG11Q96JI7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms