Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 RPPH1-201ENST00000516869 333 ntBASIC32.16■■■□□ 2.74
ARHGEF40Q8TER5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC32.15■■■□□ 2.74
ARHGEF40Q8TER5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 AP006587.3-201ENST00000525742 1516 ntBASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 RBM17P2-201ENST00000616397 1405 ntBASIC32.14■■■□□ 2.74
ARHGEF40Q8TER5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.73
ARHGEF40Q8TER5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC32.13■■■□□ 2.73
ARHGEF40Q8TER5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 C1QBPP2-201ENST00000528754 825 ntBASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 BX088651.1-201ENST00000540551 451 ntBASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ARHGEF40Q8TER5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 AP004607.7-201ENST00000527152 1677 ntBASIC32.11■■■□□ 2.73
ARHGEF40Q8TER5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 H19-210ENST00000439725 1929 ntTSL 2 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 KRT18P21-201ENST00000515767 1272 ntBASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 AC233263.1-201ENST00000578059 224 ntBASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 CYP2T3P-201ENST00000601990 817 ntBASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 Z99916.2-201ENST00000604037 246 ntBASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 AC069544.1-201ENST00000609399 999 ntBASIC32.1■■■□□ 2.73
ARHGEF40Q8TER5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
ARHGEF40Q8TER5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
ARHGEF40Q8TER5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ARHGEF40Q8TER5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
ARHGEF40Q8TER5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC32.08■■■□□ 2.73
ARHGEF40Q8TER5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
ARHGEF40Q8TER5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC32.07■■■□□ 2.73
ARHGEF40Q8TER5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 AC012618.2-201ENST00000428058 849 ntBASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
ARHGEF40Q8TER5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms