Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 AL162412.1-201ENST00000567129 965 ntBASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALMS1Q8TCU4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
ALMS1Q8TCU4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ALMS1Q8TCU4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.58□□□□□ -0.08
ALMS1Q8TCU4 AC010980.2-201ENST00000587099 1412 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 KRT17P1-201ENST00000399211 1546 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 AC012306.2-201ENST00000609350 630 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 AP003733.4-201ENST00000623785 1697 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 AP006587.3-201ENST00000525742 1516 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 TSPY15P-201ENST00000457163 923 ntBASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ALMS1Q8TCU4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 CYP2T3P-201ENST00000601990 817 ntBASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALMS1Q8TCU4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms