Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 AP004607.4-201ENST00000530158 1459 ntBASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 AC004854.2-201ENST00000608450 1441 ntBASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDND2Q8NHS1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDND2Q8NHS1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 AC016769.1-201ENST00000409132 1010 ntBASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 AC137761.2-201ENST00000561729 223 ntBASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 AC145350.3-201ENST00000569033 163 ntBASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDND2Q8NHS1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDND2Q8NHS1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDND2Q8NHS1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 AC006015.1-201ENST00000429970 570 ntBASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 AC079140.4-201ENST00000507448 529 ntBASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CLDND2Q8NHS1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms