Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 AC105233.4-201ENST00000642045 216 ntBASIC19.97■□□□□ 0.79
NUP43Q8NFH3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NUP43Q8NFH3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 SUDS3P1-201ENST00000505831 966 ntBASIC19.96■□□□□ 0.79
NUP43Q8NFH3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP43Q8NFH3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
NUP43Q8NFH3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NUP43Q8NFH3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 AP006587.3-201ENST00000525742 1516 ntBASIC19.94■□□□□ 0.78
NUP43Q8NFH3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 AC026310.3-201ENST00000625186 2373 ntBASIC19.94■□□□□ 0.78
NUP43Q8NFH3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
NUP43Q8NFH3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 MIR572-201ENST00000384983 95 ntBASIC19.93■□□□□ 0.78
NUP43Q8NFH3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 AC142381.2-201ENST00000566120 298 ntBASIC19.93■□□□□ 0.78
NUP43Q8NFH3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP43Q8NFH3 AC003102.1-202ENST00000563394 1796 ntBASIC19.93■□□□□ 0.78
NUP43Q8NFH3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 Z98882.1-201ENST00000622160 2253 ntBASIC19.92■□□□□ 0.78
NUP43Q8NFH3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUP43Q8NFH3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms