Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 LINC02228-203ENST00000641970 1355 ntBASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AC003102.1-202ENST00000563394 1796 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L2-201ENST00000561772 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 TERF1P2-201ENST00000583350 1212 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 MIR6821-201ENST00000617625 74 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L6-201ENST00000626483 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L1-201ENST00000627662 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L8-201ENST00000629013 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L3-201ENST00000630187 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L7-201ENST00000630678 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 DUX4L5-201ENST00000630834 1275 ntBASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.34■■■□□ 2.13
CCDC146Q8IYE0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC146Q8IYE0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.33■■■□□ 2.12
CCDC146Q8IYE0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 KRT18P14-201ENST00000534205 1250 ntBASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CCDC146Q8IYE0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC146Q8IYE0 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 KRT18P61-201ENST00000585825 1298 ntBASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC146Q8IYE0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC146Q8IYE0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
CCDC146Q8IYE0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC146Q8IYE0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms