Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 SMUG1P1-201ENST00000590640 811 ntBASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL3Q8IVW4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 PBX2P1-201ENST00000493219 1291 ntBASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 AC008764.7-201ENST00000593779 1081 ntBASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL3Q8IVW4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 AC027682.1-201ENST00000562846 899 ntBASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 AP006587.3-201ENST00000525742 1516 ntBASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDKL3Q8IVW4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.89■■□□□ 1.1
CDKL3Q8IVW4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CDKL3Q8IVW4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.89■■□□□ 1.1
CDKL3Q8IVW4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CDKL3Q8IVW4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDKL3Q8IVW4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 AC106739.1-201ENST00000617035 715 ntBASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL3Q8IVW4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 AC099791.1-201ENST00000416440 715 ntBASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKL3Q8IVW4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 AC003102.1-202ENST00000563394 1796 ntBASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
CDKL3Q8IVW4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL3Q8IVW4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL3Q8IVW4 EDA-201ENST00000338901 1233 ntBASIC21.86■■□□□ 1.09
CDKL3Q8IVW4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms