Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 AC010542.4-201ENST00000563151 1910 ntBASIC21.23■□□□□ 0.99
SNX20Q7Z614 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX20Q7Z614 AC055733.4-201ENST00000638462 1354 ntBASIC21.23■□□□□ 0.99
SNX20Q7Z614 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SNX20Q7Z614 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX20Q7Z614 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.22■□□□□ 0.99
SNX20Q7Z614 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX20Q7Z614 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX20Q7Z614 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX20Q7Z614 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX20Q7Z614 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX20Q7Z614 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 AC019069.1-201ENST00000610008 1333 ntBASIC21.21■□□□□ 0.99
SNX20Q7Z614 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 FBXW4P1-201ENST00000426721 2239 ntBASIC21.21■□□□□ 0.99
SNX20Q7Z614 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SNX20Q7Z614 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX20Q7Z614 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SNX20Q7Z614 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNX20Q7Z614 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX20Q7Z614 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX20Q7Z614 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX20Q7Z614 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX20Q7Z614 AC003102.1-202ENST00000563394 1796 ntBASIC21.2■□□□□ 0.98
SNX20Q7Z614 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX20Q7Z614 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX20Q7Z614 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX20Q7Z614 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX20Q7Z614 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX20Q7Z614 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX20Q7Z614 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX20Q7Z614 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX20Q7Z614 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
SNX20Q7Z614 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 AC123595.1-201ENST00000440769 1046 ntBASIC21.18■□□□□ 0.98
SNX20Q7Z614 YBX1P1-201ENST00000445822 960 ntBASIC21.18■□□□□ 0.98
SNX20Q7Z614 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 AC104564.3-201ENST00000582367 638 ntBASIC21.18■□□□□ 0.98
SNX20Q7Z614 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX20Q7Z614 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.18■□□□□ 0.98
SNX20Q7Z614 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 LINC02228-203ENST00000641970 1355 ntBASIC21.17■□□□□ 0.98
SNX20Q7Z614 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX20Q7Z614 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX20Q7Z614 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX20Q7Z614 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX20Q7Z614 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
SNX20Q7Z614 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX20Q7Z614 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX20Q7Z614 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms