Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.21■■□□□ 1.15
TTC39BQ5VTQ0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.21■■□□□ 1.15
TTC39BQ5VTQ0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.21■■□□□ 1.15
TTC39BQ5VTQ0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.21■■□□□ 1.15
TTC39BQ5VTQ0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TTC39BQ5VTQ0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 KRT18P14-201ENST00000534205 1250 ntBASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39BQ5VTQ0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39BQ5VTQ0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L2-201ENST00000561772 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L6-201ENST00000626483 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L1-201ENST00000627662 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L8-201ENST00000629013 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L3-201ENST00000630187 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L7-201ENST00000630678 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 DUX4L5-201ENST00000630834 1275 ntBASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39BQ5VTQ0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39BQ5VTQ0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 AP004607.7-201ENST00000527152 1677 ntBASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 AC005224.4-201ENST00000583262 1652 ntBASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.16■■□□□ 1.14
TTC39BQ5VTQ0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 AL162430.1-201ENST00000480705 870 ntBASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TTC39BQ5VTQ0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC39BQ5VTQ0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms