Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 AC104564.3-201ENST00000582367 638 ntBASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 OR7E47P-201ENST00000546390 1422 ntBASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P1Q5VSP4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 AC133637.1-201ENST00000624115 1537 ntBASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.22■□□□□ 0.67
LCN1P1Q5VSP4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 AL451085.2-201ENST00000605085 799 ntBASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 AC068587.7-201ENST00000641602 218 ntBASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P1Q5VSP4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P1Q5VSP4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 pRNA.6-201ENST00000610482 90 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 pRNA.5-201ENST00000612139 90 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 pRNA.11-201ENST00000618423 90 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 pRNA.13-201ENST00000619112 90 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 AC087239.1-201ENST00000622671 572 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P1Q5VSP4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 AC009299.2-201ENST00000482477 511 ntBASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P1Q5VSP4 LINC01521-201ENST00000504184 1943 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms