Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 LINC01006-201ENST00000333319 2292 ntBASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00242Q5T6M2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 AC092667.1-201ENST00000434301 2586 ntBASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00242Q5T6M2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 KRT125P-201ENST00000546827 989 ntBASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00242Q5T6M2 FEM1AP1-201ENST00000431297 1995 ntBASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 AL121603.2-201ENST00000557373 2117 ntBASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 AL049796.1-201ENST00000565336 1766 ntBASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00242Q5T6M2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 AC133637.1-201ENST00000624115 1537 ntBASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 AL451085.2-201ENST00000605085 799 ntBASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 AC241377.3-202ENST00000626088 1088 ntBASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 AC241585.3-202ENST00000628937 1088 ntBASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 AC245100.8-202ENST00000629247 1058 ntBASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00242Q5T6M2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms