Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 TRAF4-203ENST00000394925 702 ntTSL 218.67■□□□□ 0.581e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.381e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-216ENST00000586813 789 ntTSL 317.22■□□□□ 0.351e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-212ENST00000498540 748 ntTSL 312.97□□□□□ -0.331e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-210ENST00000475329 544 ntTSL 312.96□□□□□ -0.331e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC10.88□□□□□ -0.671e-8■■■□□ 18
DDX59Q5T1V6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.032e-6■■■□□ 17.9
DDX59Q5T1V6 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)19.95■□□□□ 0.782e-6■■■□□ 17.9
DDX59Q5T1V6 ABAT-207ENST00000563992 1870 ntTSL 213.06□□□□□ -0.325e-9■■■□□ 17.9
DDX59Q5T1V6 ABAT-209ENST00000564714 466 ntTSL 310.77□□□□□ -0.695e-9■■■□□ 17.9
DDX59Q5T1V6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.246e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.026e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-204ENST00000434065 2541 ntTSL 221.34■■□□□ 1.016e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.16■□□□□ 0.666e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-202ENST00000383815 2808 ntTSL 218.48■□□□□ 0.556e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-205ENST00000444427 952 ntTSL 29.7□□□□□ -0.866e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-210ENST00000483258 375 ntTSL 39.65□□□□□ -0.866e-11■■■□□ 17.9
DDX59Q5T1V6 IL17RE-209ENST00000480244 416 ntTSL 37.48□□□□□ -1.216e-11■■■□□ 17.9
DDX59Q5T1V6 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.33e-6■■■□□ 17.9
DDX59Q5T1V6 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.33e-6■■■□□ 17.9
DDX59Q5T1V6 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■■□□ 17.9
DDX59Q5T1V6 RBM10-205ENST00000496012 509 ntTSL 512.11□□□□□ -0.473e-6■■■□□ 17.9
DDX59Q5T1V6 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.593e-6■■■□□ 17.9
DDX59Q5T1V6 PECR-207ENST00000487318 742 ntTSL 513.51□□□□□ -0.254e-7■■■□□ 17.9
DDX59Q5T1V6 PECR-208ENST00000497889 824 ntTSL 512.97□□□□□ -0.334e-7■■■□□ 17.9
DDX59Q5T1V6 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.44e-7■■■□□ 17.9
DDX59Q5T1V6 PECR-206ENST00000474093 585 ntTSL 212.14□□□□□ -0.474e-7■■■□□ 17.9
DDX59Q5T1V6 PECR-204ENST00000464722 640 ntTSL 45.73□□□□□ -1.494e-7■■■□□ 17.9
DDX59Q5T1V6 B4GALNT4-205ENST00000534778 876 ntTSL 314.91□□□□□ -0.024e-10■■■□□ 17.8
DDX59Q5T1V6 EP400NL-204ENST00000407361 945 ntTSL 319.18■□□□□ 0.661e-6■■■□□ 17.8
DDX59Q5T1V6 EP400NL-201ENST00000332441 2741 ntTSL 218.88■□□□□ 0.611e-6■■■□□ 17.8
DDX59Q5T1V6 EP400NL-211ENST00000539205 583 ntTSL 317.21■□□□□ 0.351e-6■■■□□ 17.8
DDX59Q5T1V6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -03e-7■■■□□ 17.8
DDX59Q5T1V6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.263e-7■■■□□ 17.8
DDX59Q5T1V6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.336e-13■■■□□ 17.8
DDX59Q5T1V6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.68■□□□□ 0.16e-13■■■□□ 17.8
DDX59Q5T1V6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.27■□□□□ 0.036e-13■■■□□ 17.8
DDX59Q5T1V6 CLPTM1L-203ENST00000503151 627 ntTSL 311.86□□□□□ -0.516e-13■■■□□ 17.8
DDX59Q5T1V6 CLPTM1L-210ENST00000508765 631 ntTSL 311.41□□□□□ -0.586e-13■■■□□ 17.8
DDX59Q5T1V6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.013e-6■■■□□ 17.8
DDX59Q5T1V6 DNAJC5-202ENST00000470551 5287 ntTSL 213.9□□□□□ -0.183e-6■■■□□ 17.8
DDX59Q5T1V6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.32■■□□□ 1.481e-6■■■□□ 17.7
DDX59Q5T1V6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.441e-6■■■□□ 17.7
DDX59Q5T1V6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.111e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-206ENST00000487502 699 ntTSL 221.31■■□□□ 11e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.931e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.851e-6■■■□□ 17.7
DDX59Q5T1V6 CDC34-205ENST00000606065 1062 ntTSL 520.14■□□□□ 0.811e-6■■■□□ 17.7
DDX59Q5T1V6 NECAB3-221ENST00000607055 554 ntTSL 419.98■□□□□ 0.791e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.9■□□□□ 0.781e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-204ENST00000468128 782 ntTSL 519.73■□□□□ 0.751e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.36■□□□□ 0.691e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.651e-6■■■□□ 17.7
DDX59Q5T1V6 SPHK1-206ENST00000590379 588 ntTSL 319.04■□□□□ 0.641e-6■■■□□ 17.7
DDX59Q5T1V6 SPHK1-208ENST00000591651 541 ntTSL 419.02■□□□□ 0.641e-6■■■□□ 17.7
DDX59Q5T1V6 POLR2A-206ENST00000576553 602 ntTSL 218.77■□□□□ 0.62e-9■■■□□ 17.7
DDX59Q5T1V6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.19■□□□□ 0.52e-9■■■□□ 17.7
DDX59Q5T1V6 CDC34-206ENST00000606400 899 ntTSL 217.35■□□□□ 0.371e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-205ENST00000504092 920 ntTSL 516.74■□□□□ 0.271e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.38■□□□□ 0.211e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-208ENST00000506180 843 ntTSL 516.35■□□□□ 0.211e-6■■■□□ 17.7
DDX59Q5T1V6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.181e-6■■■□□ 17.7
DDX59Q5T1V6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16■□□□□ 0.151e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-207ENST00000505826 657 ntTSL 515.75■□□□□ 0.111e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-216ENST00000514669 809 ntTSL 315.75■□□□□ 0.111e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-203ENST00000427128 3312 ntTSL 1 (best)15.36■□□□□ 0.051e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 01e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.021e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.91□□□□□ -0.021e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.87□□□□□ -0.031e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.041e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-208ENST00000490660 2867 ntTSL 214.73□□□□□ -0.051e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.051e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-209ENST00000570306 4533 ntTSL 214.62□□□□□ -0.071e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-210ENST00000510739 774 ntTSL 314.34□□□□□ -0.111e-6■■■□□ 17.7
DDX59Q5T1V6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.131e-6■■■□□ 17.7
DDX59Q5T1V6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.141e-6■■■□□ 17.7
DDX59Q5T1V6 SUV39H1-203ENST00000462786 746 ntTSL 214.02□□□□□ -0.171e-6■■■□□ 17.7
DDX59Q5T1V6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14□□□□□ -0.171e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.45□□□□□ -0.261e-6■■■□□ 17.7
DDX59Q5T1V6 AGAP3-204ENST00000463179 589 ntTSL 213.41□□□□□ -0.261e-6■■■□□ 17.7
DDX59Q5T1V6 ARAP1-216ENST00000542596 699 ntTSL 513.35□□□□□ -0.271e-6■■■□□ 17.7
DDX59Q5T1V6 GNB2-210ENST00000451587 887 ntTSL 513.19□□□□□ -0.31e-6■■■□□ 17.7
DDX59Q5T1V6 CTBP1-206ENST00000504784 418 ntTSL 312.93□□□□□ -0.341e-6■■■□□ 17.7
DDX59Q5T1V6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.41e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■■□□ 17.7
DDX59Q5T1V6 SUV39H1-201ENST00000337852 2978 ntTSL 2 BASIC11.64□□□□□ -0.551e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC11.46□□□□□ -0.581e-6■■■□□ 17.7
DDX59Q5T1V6 MAPK7-210ENST00000571657 699 ntTSL 310.58□□□□□ -0.721e-6■■■□□ 17.7
DDX59Q5T1V6 SUV39H1-204ENST00000482260 778 ntTSL 310.45□□□□□ -0.741e-6■■■□□ 17.7
DDX59Q5T1V6 NAPB-205ENST00000472855 1651 ntTSL 27.36□□□□□ -1.231e-6■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-208ENST00000513781 759 ntTSL 312.8□□□□□ -0.362e-9■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-210ENST00000515060 433 ntTSL 312.13□□□□□ -0.472e-9■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC10.27□□□□□ -0.772e-9■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-201ENST00000355938 598 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.792e-9■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-206ENST00000506855 468 ntTSL 3 BASIC9.58□□□□□ -0.882e-9■■■□□ 17.7
DDX59Q5T1V6 ATP5G1-203ENST00000502964 679 ntTSL 29.27□□□□□ -0.932e-9■■■□□ 17.7
Retrieved 100 of 7,289 protein–RNA pairs in 148.3 ms