Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc1aQ3UWR2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc1aQ3UWR2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.15□□□□□ -0.14
Khdc1aQ3UWR2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.15□□□□□ -0.14
Khdc1aQ3UWR2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc1aQ3UWR2 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.15□□□□□ -0.15
Khdc1aQ3UWR2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc1aQ3UWR2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.13□□□□□ -0.15
Khdc1aQ3UWR2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc1aQ3UWR2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc1aQ3UWR2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc1aQ3UWR2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc1aQ3UWR2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms