Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.53■□□□□ 0.56
TBC1D28Q2M2D7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D28Q2M2D7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.52■□□□□ 0.55
TBC1D28Q2M2D7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
TBC1D28Q2M2D7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 AC055733.4-201ENST00000638462 1354 ntBASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D28Q2M2D7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 AC097381.1-201ENST00000429019 1296 ntBASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 AC079140.4-201ENST00000507448 529 ntBASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 AC079834.2-201ENST00000609776 1949 ntBASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D28Q2M2D7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 RARRES2P6-201ENST00000567333 442 ntBASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 CCDC92B-201ENST00000575506 885 ntBASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 MIR6821-201ENST00000617625 74 ntBASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TBC1D28Q2M2D7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms