Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 FLO10YKR102W 3510 nt3.6□□□□□ -1.83
RPA49Q01080 BI3Q0115 1554 nt3.59□□□□□ -1.83
RPA49Q01080 FRE4YNR060W 2160 nt3.59□□□□□ -1.83
RPA49Q01080 YDR131CYDR131C 1671 nt3.59□□□□□ -1.83
RPA49Q01080 KRE5YOR336W 4098 nt3.59□□□□□ -1.83
RPA49Q01080 GPP2YER062C 753 nt3.59□□□□□ -1.83
RPA49Q01080 RDN58-1RDN58-1 158 nt3.59□□□□□ -1.83
RPA49Q01080 RDN58-2RDN58-2 158 nt3.59□□□□□ -1.83
RPA49Q01080 MCT1YOR221C 1083 nt3.59□□□□□ -1.83
RPA49Q01080 RPA135YPR010C 3612 nt3.59□□□□□ -1.84
RPA49Q01080 TFB2YPL122C 1542 nt3.59□□□□□ -1.84
RPA49Q01080 NUP60YAR002W 1620 nt3.59□□□□□ -1.84
RPA49Q01080 ALG8YOR067C 1734 nt3.58□□□□□ -1.84
RPA49Q01080 CDC5YMR001C 2118 nt3.58□□□□□ -1.84
RPA49Q01080 UBC9YDL064W 474 nt3.58□□□□□ -1.84
RPA49Q01080 QRI7YDL104C 1224 nt3.58□□□□□ -1.84
RPA49Q01080 YDR535CYDR535C 501 nt3.58□□□□□ -1.84
RPA49Q01080 YGR064WYGR064W 369 nt3.58□□□□□ -1.84
RPA49Q01080 DOG1YHR044C 741 nt3.58□□□□□ -1.84
RPA49Q01080 YVH1YIR026C 1095 nt3.58□□□□□ -1.84
RPA49Q01080 YAL034C-BYAL034C-B 354 nt3.58□□□□□ -1.84
RPA49Q01080 ERP1YAR002C-A 660 nt3.58□□□□□ -1.84
RPA49Q01080 SHH3YMR118C 591 nt3.58□□□□□ -1.84
RPA49Q01080 ERV15YBR210W 429 nt3.58□□□□□ -1.84
RPA49Q01080 snR44snR44 211 nt3.58□□□□□ -1.84
RPA49Q01080 YDR034C-CYDR034C-C 1317 nt3.58□□□□□ -1.84
RPA49Q01080 YLR410W-AYLR410W-A 1317 nt3.58□□□□□ -1.84
RPA49Q01080 SEC27YGL137W 2670 nt3.58□□□□□ -1.84
RPA49Q01080 SPA2YLL021W 4401 nt3.58□□□□□ -1.84
RPA49Q01080 AEP2YMR282C 1743 nt3.58□□□□□ -1.84
RPA49Q01080 THR4YCR053W 1545 nt3.57□□□□□ -1.84
RPA49Q01080 DSE1YER124C 1722 nt3.57□□□□□ -1.84
RPA49Q01080 PKP2YGL059W 1476 nt3.57□□□□□ -1.84
RPA49Q01080 MTM1YGR257C 1101 nt3.57□□□□□ -1.84
RPA49Q01080 MSR1YHR091C 1932 nt3.57□□□□□ -1.84
RPA49Q01080 tV(CAC)DtV(CAC)D 73 nt3.57□□□□□ -1.84
RPA49Q01080 tV(CAC)HtV(CAC)H 73 nt3.57□□□□□ -1.84
RPA49Q01080 ANB1YJR047C 474 nt3.57□□□□□ -1.84
RPA49Q01080 YJR111CYJR111C 852 nt3.57□□□□□ -1.84
RPA49Q01080 GPN3YLR243W 819 nt3.57□□□□□ -1.84
RPA49Q01080 NEJ1YLR265C 1029 nt3.57□□□□□ -1.84
RPA49Q01080 YML096WYML096W 1578 nt3.57□□□□□ -1.84
RPA49Q01080 FMP41YNL168C 780 nt3.57□□□□□ -1.84
RPA49Q01080 DCP1YOL149W 696 nt3.57□□□□□ -1.84
RPA49Q01080 ABP140YOR239W 1887 nt3.57□□□□□ -1.84
RPA49Q01080 YPL035CYPL035C 348 nt3.57□□□□□ -1.84
RPA49Q01080 LCB5YLR260W 2064 nt3.56□□□□□ -1.84
RPA49Q01080 WHI3YNL197C 1986 nt3.56□□□□□ -1.84
RPA49Q01080 TGL2YDR058C 981 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)DtK(UUU)D 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)G1tK(UUU)G1 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)G2tK(UUU)G2 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)KtK(UUU)K 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)LtK(UUU)L 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)OtK(UUU)O 73 nt3.56□□□□□ -1.84
RPA49Q01080 tK(UUU)PtK(UUU)P 73 nt3.56□□□□□ -1.84
RPA49Q01080 YGR114CYGR114C 390 nt3.56□□□□□ -1.84
RPA49Q01080 MPC3YGR243W 441 nt3.56□□□□□ -1.84
RPA49Q01080 FSH1YHR049W 732 nt3.56□□□□□ -1.84
RPA49Q01080 PBA1YLR199C 831 nt3.56□□□□□ -1.84
RPA49Q01080 TPM1YNL079C 600 nt3.56□□□□□ -1.84
RPA49Q01080 LDS2YOL047C 1071 nt3.56□□□□□ -1.84
RPA49Q01080 EXO5YBR163W 1758 nt3.56□□□□□ -1.84
RPA49Q01080 MRS2YOR334W 1413 nt3.55□□□□□ -1.84
RPA49Q01080 RIM4YHL024W 2142 nt3.55□□□□□ -1.84
RPA49Q01080 STE24YJR117W 1362 nt3.55□□□□□ -1.84
RPA49Q01080 HDA2YDR295C 2025 nt3.55□□□□□ -1.84
RPA49Q01080 YDL162CYDL162C 357 nt3.55□□□□□ -1.84
RPA49Q01080 YDR090CYDR090C 933 nt3.55□□□□□ -1.84
RPA49Q01080 EMC2YJR088C 879 nt3.55□□□□□ -1.84
RPA49Q01080 RLP7YNL002C 969 nt3.55□□□□□ -1.84
RPA49Q01080 HUT1YPL244C 1020 nt3.55□□□□□ -1.84
RPA49Q01080 PIN3YPR154W 648 nt3.55□□□□□ -1.84
RPA49Q01080 GPI10YGL142C 1851 nt3.54□□□□□ -1.84
RPA49Q01080 YNR063WYNR063W 1824 nt3.54□□□□□ -1.84
RPA49Q01080 MSM1YGR171C 1728 nt3.54□□□□□ -1.84
RPA49Q01080 OPI6YDL096C 327 nt3.54□□□□□ -1.84
RPA49Q01080 PHM6YDR281C 315 nt3.54□□□□□ -1.84
RPA49Q01080 PAU10YDR542W 363 nt3.54□□□□□ -1.84
RPA49Q01080 PAU11YGL261C 363 nt3.54□□□□□ -1.84
RPA49Q01080 YGR111WYGR111W 1203 nt3.54□□□□□ -1.84
RPA49Q01080 PAU13YHL046C 363 nt3.54□□□□□ -1.84
RPA49Q01080 CUP1-1YHR053C 186 nt3.54□□□□□ -1.84
RPA49Q01080 CUP1-2YHR055C 186 nt3.54□□□□□ -1.84
RPA49Q01080 YIL161WYIL161W 708 nt3.54□□□□□ -1.84
RPA49Q01080 SNX4YJL036W 1272 nt3.54□□□□□ -1.84
RPA49Q01080 YLR285C-AYLR285C-A 171 nt3.54□□□□□ -1.84
RPA49Q01080 PAU4YLR461W 363 nt3.54□□□□□ -1.84
RPA49Q01080 TRI1YMR233W 681 nt3.54□□□□□ -1.84
RPA49Q01080 INN1YNL152W 1230 nt3.54□□□□□ -1.84
RPA49Q01080 APA1YCL050C 966 nt3.54□□□□□ -1.84
RPA49Q01080 IOC2YLR095C 2439 nt3.54□□□□□ -1.84
RPA49Q01080 PIN4YBL051C 2007 nt3.53□□□□□ -1.84
RPA49Q01080 YDR089WYDR089W 2610 nt3.53□□□□□ -1.84
RPA49Q01080 PIB1YDR313C 861 nt3.53□□□□□ -1.84
RPA49Q01080 YDR526CYDR526C 471 nt3.53□□□□□ -1.84
RPA49Q01080 RGI1YER067W 486 nt3.53□□□□□ -1.84
RPA49Q01080 YGL063C-AYGL063C-A 150 nt3.53□□□□□ -1.84
RPA49Q01080 MMF1YIL051C 438 nt3.53□□□□□ -1.84
RPA49Q01080 YNL320WYNL320W 855 nt3.53□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms