Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RPL39P62891 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPL39P62891 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPL39P62891 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.05■□□□□ -0
RPL39P62891 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RPL39P62891 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.05■□□□□ -0
RPL39P62891 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPL39P62891 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RPL39P62891 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.04■□□□□ -0
RPL39P62891 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 AC104564.3-201ENST00000582367 638 ntBASIC15.04■□□□□ -0
RPL39P62891 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RPL39P62891 MIR6722-201ENST00000617286 78 ntBASIC15.04■□□□□ -0
RPL39P62891 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.04■□□□□ -0
RPL39P62891 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RPL39P62891 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.03■□□□□ -0
RPL39P62891 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.03■□□□□ -0
RPL39P62891 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.03■□□□□ -0
RPL39P62891 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.03■□□□□ -0
RPL39P62891 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.03■□□□□ -0
RPL39P62891 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.03■□□□□ -0
RPL39P62891 MIR4508-201ENST00000584178 70 ntBASIC15.03■□□□□ -0
RPL39P62891 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPL39P62891 FEM1AP1-201ENST00000431297 1995 ntBASIC15.03■□□□□ -0
RPL39P62891 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.03■□□□□ -0
RPL39P62891 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPL39P62891 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.02■□□□□ -0
RPL39P62891 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.02■□□□□ -0
RPL39P62891 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.02■□□□□ -0
RPL39P62891 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPL39P62891 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.02■□□□□ -0
RPL39P62891 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.02■□□□□ -0
RPL39P62891 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RPL39P62891 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.02■□□□□ -0
RPL39P62891 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPL39P62891 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPL39P62891 AC009102.2-201ENST00000606772 1639 ntBASIC15.02□□□□□ -0.01
RPL39P62891 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPL39P62891 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPL39P62891 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RPL39P62891 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.01□□□□□ -0.01
RPL39P62891 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RPL39P62891 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.01□□□□□ -0.01
RPL39P62891 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 ABHD17AP5-201ENST00000580133 923 ntBASIC15.01□□□□□ -0.01
RPL39P62891 AC137630.3-201ENST00000607245 391 ntBASIC15.01□□□□□ -0.01
RPL39P62891 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.01□□□□□ -0.01
RPL39P62891 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPL39P62891 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.01□□□□□ -0.01
RPL39P62891 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPL39P62891 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RPL39P62891 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPL39P62891 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPL39P62891 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15□□□□□ -0.01
RPL39P62891 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPL39P62891 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms