Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HLCSP50747 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLCSP50747 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.32■□□□□ 0.84
HLCSP50747 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HLCSP50747 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 AC097381.1-201ENST00000429019 1296 ntBASIC20.32■□□□□ 0.84
HLCSP50747 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.32■□□□□ 0.84
HLCSP50747 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.32■□□□□ 0.84
HLCSP50747 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
HLCSP50747 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.32■□□□□ 0.84
HLCSP50747 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLCSP50747 AC010542.4-201ENST00000563151 1910 ntBASIC20.31■□□□□ 0.84
HLCSP50747 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.31■□□□□ 0.84
HLCSP50747 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.31■□□□□ 0.84
HLCSP50747 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HLCSP50747 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.31■□□□□ 0.84
HLCSP50747 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.31■□□□□ 0.84
HLCSP50747 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
HLCSP50747 MIR5787-201ENST00000611784 55 ntBASIC20.31■□□□□ 0.84
HLCSP50747 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.31■□□□□ 0.84
HLCSP50747 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HLCSP50747 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLCSP50747 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.31■□□□□ 0.84
HLCSP50747 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.31■□□□□ 0.84
HLCSP50747 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.3■□□□□ 0.84
HLCSP50747 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HLCSP50747 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.3■□□□□ 0.84
HLCSP50747 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.3■□□□□ 0.84
HLCSP50747 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.3■□□□□ 0.84
HLCSP50747 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.3■□□□□ 0.84
HLCSP50747 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.3■□□□□ 0.84
HLCSP50747 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLCSP50747 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.29■□□□□ 0.84
HLCSP50747 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.29■□□□□ 0.84
HLCSP50747 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 MIR572-201ENST00000384983 95 ntBASIC20.29■□□□□ 0.84
HLCSP50747 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.29■□□□□ 0.84
HLCSP50747 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HLCSP50747 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLCSP50747 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HLCSP50747 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLCSP50747 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLCSP50747 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.28■□□□□ 0.84
HLCSP50747 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLCSP50747 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.28■□□□□ 0.84
HLCSP50747 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
HLCSP50747 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.28■□□□□ 0.84
HLCSP50747 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLCSP50747 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HLCSP50747 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
HLCSP50747 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLCSP50747 AC004687.1-201ENST00000579003 1625 ntBASIC20.27■□□□□ 0.84
HLCSP50747 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HLCSP50747 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLCSP50747 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.27■□□□□ 0.84
HLCSP50747 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms