Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.32■□□□□ 0.84
GABRA4P48169 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GABRA4P48169 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.32■□□□□ 0.84
GABRA4P48169 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GABRA4P48169 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 AC010141.2-201ENST00000452426 721 ntBASIC20.31■□□□□ 0.84
GABRA4P48169 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
GABRA4P48169 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
GABRA4P48169 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABRA4P48169 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.31■□□□□ 0.84
GABRA4P48169 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
GABRA4P48169 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.3■□□□□ 0.84
GABRA4P48169 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.3■□□□□ 0.84
GABRA4P48169 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 RAP2CP1-201ENST00000605103 478 ntBASIC20.3■□□□□ 0.84
GABRA4P48169 AC080038.1-201ENST00000611274 1154 ntBASIC20.3■□□□□ 0.84
GABRA4P48169 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
GABRA4P48169 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
GABRA4P48169 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABRA4P48169 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.29■□□□□ 0.84
GABRA4P48169 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GABRA4P48169 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
GABRA4P48169 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.29■□□□□ 0.84
GABRA4P48169 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.29■□□□□ 0.84
GABRA4P48169 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
GABRA4P48169 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABRA4P48169 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
GABRA4P48169 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.28■□□□□ 0.84
GABRA4P48169 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.28■□□□□ 0.84
GABRA4P48169 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
GABRA4P48169 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GABRA4P48169 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 CDCA4P2-201ENST00000441182 718 ntBASIC20.28■□□□□ 0.84
GABRA4P48169 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.28■□□□□ 0.84
GABRA4P48169 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.28■□□□□ 0.84
GABRA4P48169 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.28■□□□□ 0.84
GABRA4P48169 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.28■□□□□ 0.84
GABRA4P48169 BID-214ENST00000617586 542 ntTSL 5 BASIC20.28■□□□□ 0.84
GABRA4P48169 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.28■□□□□ 0.84
GABRA4P48169 AC073111.5-205ENST00000641717 521 ntBASIC20.28■□□□□ 0.84
GABRA4P48169 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.28■□□□□ 0.84
GABRA4P48169 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABRA4P48169 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.27■□□□□ 0.84
GABRA4P48169 AC026471.6-201ENST00000622954 1905 ntBASIC20.27■□□□□ 0.84
GABRA4P48169 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 AC003102.1-202ENST00000563394 1796 ntBASIC20.27■□□□□ 0.84
GABRA4P48169 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.27■□□□□ 0.84
GABRA4P48169 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GABRA4P48169 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 UBE2DNL-204ENST00000602536 740 ntBASIC20.27■□□□□ 0.84
GABRA4P48169 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRA4P48169 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GABRA4P48169 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABRA4P48169 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABRA4P48169 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
GABRA4P48169 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABRA4P48169 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms