Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.34■□□□□ 0.85
XCR1P46094 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.34■□□□□ 0.85
XCR1P46094 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
XCR1P46094 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.34■□□□□ 0.85
XCR1P46094 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
XCR1P46094 TERF1P2-201ENST00000583350 1212 ntBASIC20.34■□□□□ 0.85
XCR1P46094 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.34■□□□□ 0.85
XCR1P46094 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
XCR1P46094 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XCR1P46094 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.33■□□□□ 0.85
XCR1P46094 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.33■□□□□ 0.85
XCR1P46094 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
XCR1P46094 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
XCR1P46094 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.33■□□□□ 0.85
XCR1P46094 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 KRT18P14-201ENST00000534205 1250 ntBASIC20.33■□□□□ 0.85
XCR1P46094 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.33■□□□□ 0.85
XCR1P46094 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
XCR1P46094 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
XCR1P46094 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
XCR1P46094 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.33■□□□□ 0.84
XCR1P46094 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
XCR1P46094 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
XCR1P46094 AL137060.1-201ENST00000618151 2648 ntBASIC20.32■□□□□ 0.84
XCR1P46094 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.32■□□□□ 0.84
XCR1P46094 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.32■□□□□ 0.84
XCR1P46094 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L2-201ENST00000561772 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L6-201ENST00000626483 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L1-201ENST00000627662 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L8-201ENST00000629013 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L3-201ENST00000630187 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L7-201ENST00000630678 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 DUX4L5-201ENST00000630834 1275 ntBASIC20.32■□□□□ 0.84
XCR1P46094 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
XCR1P46094 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
XCR1P46094 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.32■□□□□ 0.84
XCR1P46094 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XCR1P46094 AP004607.7-201ENST00000527152 1677 ntBASIC20.32■□□□□ 0.84
XCR1P46094 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
XCR1P46094 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.31■□□□□ 0.84
XCR1P46094 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.31■□□□□ 0.84
XCR1P46094 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.31■□□□□ 0.84
XCR1P46094 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
XCR1P46094 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XCR1P46094 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.3■□□□□ 0.84
XCR1P46094 AC009237.3-201ENST00000393279 1427 ntBASIC20.3■□□□□ 0.84
XCR1P46094 AL162430.1-201ENST00000480705 870 ntBASIC20.3■□□□□ 0.84
XCR1P46094 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.3■□□□□ 0.84
XCR1P46094 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
XCR1P46094 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XCR1P46094 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.29■□□□□ 0.84
XCR1P46094 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XCR1P46094 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XCR1P46094 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.29■□□□□ 0.84
XCR1P46094 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
XCR1P46094 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
XCR1P46094 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.29■□□□□ 0.84
XCR1P46094 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XCR1P46094 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
XCR1P46094 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XCR1P46094 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms