Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 SRO9YCL037C 1305 nt3.37□□□□□ -1.87
RTR1P40084 TDA3YHR009C 1572 nt3.37□□□□□ -1.87
RTR1P40084 DSN1YIR010W 1731 nt3.36□□□□□ -1.87
RTR1P40084 MIG1YGL035C 1515 nt3.36□□□□□ -1.87
RTR1P40084 GRX6YDL010W 696 nt3.36□□□□□ -1.87
RTR1P40084 BUD30YDL151C 582 nt3.36□□□□□ -1.87
RTR1P40084 STE14YDR410C 720 nt3.36□□□□□ -1.87
RTR1P40084 YIP5YGL161C 933 nt3.36□□□□□ -1.87
RTR1P40084 YHR214C-DYHR214C-D 294 nt3.36□□□□□ -1.87
RTR1P40084 YAR069CYAR069C 294 nt3.36□□□□□ -1.87
RTR1P40084 YLR326WYLR326W 723 nt3.36□□□□□ -1.87
RTR1P40084 TRI1YMR233W 681 nt3.36□□□□□ -1.87
RTR1P40084 CPR8YNR028W 927 nt3.36□□□□□ -1.87
RTR1P40084 VAM10YOR068C 345 nt3.36□□□□□ -1.87
RTR1P40084 SQS1YNL224C 2304 nt3.36□□□□□ -1.87
RTR1P40084 FLO9YAL063C 3969 nt3.36□□□□□ -1.87
RTR1P40084 STP1YDR463W 1560 nt3.35□□□□□ -1.87
RTR1P40084 YJL132WYJL132W 2253 nt3.35□□□□□ -1.87
RTR1P40084 IKI3YLR384C 4050 nt3.35□□□□□ -1.87
RTR1P40084 PRE1YER012W 597 nt3.35□□□□□ -1.87
RTR1P40084 YFL041W-AYFL041W-A 192 nt3.35□□□□□ -1.87
RTR1P40084 YJR020WYJR020W 333 nt3.35□□□□□ -1.87
RTR1P40084 PPT2YPL148C 522 nt3.35□□□□□ -1.87
RTR1P40084 COA2YPL189C-A 207 nt3.35□□□□□ -1.87
RTR1P40084 MCM16YPR046W 546 nt3.35□□□□□ -1.87
RTR1P40084 YBR242WYBR242W 717 nt3.35□□□□□ -1.87
RTR1P40084 CCM1YGR150C 2595 nt3.35□□□□□ -1.87
RTR1P40084 SEC7YDR170C 6030 nt3.35□□□□□ -1.87
RTR1P40084 FRQ1YDR373W 573 nt3.34□□□□□ -1.87
RTR1P40084 YUH1YJR099W 711 nt3.34□□□□□ -1.87
RTR1P40084 YIM2YMR151W 438 nt3.34□□□□□ -1.87
RTR1P40084 YOR238WYOR238W 912 nt3.34□□□□□ -1.87
RTR1P40084 NAB3YPL190C 2409 nt3.34□□□□□ -1.87
RTR1P40084 HER2YMR293C 1395 nt3.34□□□□□ -1.88
RTR1P40084 ECM29YHL030W 5607 nt3.34□□□□□ -1.88
RTR1P40084 DSL1YNL258C 2265 nt3.33□□□□□ -1.88
RTR1P40084 YCR007CYCR007C 720 nt3.33□□□□□ -1.88
RTR1P40084 PDS1YDR113C 1122 nt3.33□□□□□ -1.88
RTR1P40084 YLR347W-AYLR347W-A 141 nt3.33□□□□□ -1.88
RTR1P40084 RPL23AYBL087C 414 nt3.33□□□□□ -1.88
RTR1P40084 DGA1YOR245C 1257 nt3.33□□□□□ -1.88
RTR1P40084 YLR278CYLR278C 4026 nt3.33□□□□□ -1.88
RTR1P40084 YIG1YPL201C 1386 nt3.33□□□□□ -1.88
RTR1P40084 ESL1YIL151C 3357 nt3.33□□□□□ -1.88
RTR1P40084 SNQ2YDR011W 4506 nt3.33□□□□□ -1.88
RTR1P40084 RPL14BYHL001W 417 nt3.32□□□□□ -1.88
RTR1P40084 MRPL49YJL096W 486 nt3.32□□□□□ -1.88
RTR1P40084 BUR2YLR226W 1188 nt3.32□□□□□ -1.88
RTR1P40084 PEX11YOL147C 711 nt3.32□□□□□ -1.88
RTR1P40084 BCK1YJL095W 4437 nt3.32□□□□□ -1.88
RTR1P40084 TPD3YAL016W 1908 nt3.32□□□□□ -1.88
RTR1P40084 FAS1YKL182W 6156 nt3.31□□□□□ -1.88
RTR1P40084 CDC20YGL116W 1833 nt3.31□□□□□ -1.88
RTR1P40084 MEK1YOR351C 1494 nt3.31□□□□□ -1.88
RTR1P40084 VFA1YER128W 612 nt3.31□□□□□ -1.88
RTR1P40084 BUR6YER159C 429 nt3.31□□□□□ -1.88
RTR1P40084 LIF1YGL090W 1266 nt3.31□□□□□ -1.88
RTR1P40084 PMS1YNL082W 2622 nt3.31□□□□□ -1.88
RTR1P40084 YDR089WYDR089W 2610 nt3.3□□□□□ -1.88
RTR1P40084 TRE2YOR256C 2430 nt3.3□□□□□ -1.88
RTR1P40084 CUS1YMR240C 1311 nt3.3□□□□□ -1.88
RTR1P40084 APC11YDL008W 498 nt3.3□□□□□ -1.88
RTR1P40084 YDL242WYDL242W 354 nt3.3□□□□□ -1.88
RTR1P40084 PEX10YDR265W 1014 nt3.3□□□□□ -1.88
RTR1P40084 RPL24BYGR148C 468 nt3.3□□□□□ -1.88
RTR1P40084 YHR032W-AYHR032W-A 180 nt3.3□□□□□ -1.88
RTR1P40084 PEX18YHR160C 852 nt3.3□□□□□ -1.88
RTR1P40084 PET130YJL023C 1044 nt3.3□□□□□ -1.88
RTR1P40084 RPL13BYMR142C 600 nt3.3□□□□□ -1.88
RTR1P40084 AIM39YOL053W 1188 nt3.3□□□□□ -1.88
RTR1P40084 YBL108WYBL108W 306 nt3.3□□□□□ -1.88
RTR1P40084 MOT1YPL082C 5604 nt3.3□□□□□ -1.88
RTR1P40084 ARG2YJL071W 1725 nt3.3□□□□□ -1.88
RTR1P40084 YIL082W-AYIL082W-A 4497 nt3.29□□□□□ -1.88
RTR1P40084 PNC1YGL037C 651 nt3.29□□□□□ -1.88
RTR1P40084 YGR053CYGR053C 852 nt3.29□□□□□ -1.88
RTR1P40084 CSM2YIL132C 642 nt3.29□□□□□ -1.88
RTR1P40084 YIR014WYIR014W 729 nt3.29□□□□□ -1.88
RTR1P40084 RPS7AYOR096W 573 nt3.29□□□□□ -1.88
RTR1P40084 YFL040WYFL040W 1623 nt3.29□□□□□ -1.88
RTR1P40084 SEC26YDR238C 2922 nt3.29□□□□□ -1.88
RTR1P40084 CTF18YMR078C 2226 nt3.28□□□□□ -1.88
RTR1P40084 YMR1YJR110W 2067 nt3.28□□□□□ -1.88
RTR1P40084 HAA1YPR008W 2085 nt3.28□□□□□ -1.88
RTR1P40084 QRI7YDL104C 1224 nt3.28□□□□□ -1.88
RTR1P40084 SED5YLR026C 1023 nt3.28□□□□□ -1.88
RTR1P40084 SPC3YLR066W 555 nt3.28□□□□□ -1.88
RTR1P40084 YMR147WYMR147W 672 nt3.28□□□□□ -1.88
RTR1P40084 TAF14YPL129W 735 nt3.28□□□□□ -1.88
RTR1P40084 APN2YBL019W 1563 nt3.28□□□□□ -1.88
RTR1P40084 GYP6YJL044C 1377 nt3.27□□□□□ -1.89
RTR1P40084 snR70snR70 164 nt3.27□□□□□ -1.89
RTR1P40084 CLB3YDL155W 1284 nt3.27□□□□□ -1.89
RTR1P40084 MMS2YGL087C 414 nt3.27□□□□□ -1.89
RTR1P40084 YKL066WYKL066W 444 nt3.27□□□□□ -1.89
RTR1P40084 ATP25YMR098C 1839 nt3.27□□□□□ -1.89
RTR1P40084 AEP2YMR282C 1743 nt3.27□□□□□ -1.89
RTR1P40084 SLN1YIL147C 3663 nt3.26□□□□□ -1.89
RTR1P40084 CTK1YKL139W 1587 nt3.26□□□□□ -1.89
RTR1P40084 PFK26YIL107C 2484 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms