Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 DIM1YPL266W 957 nt3.08□□□□□ -1.92
TDA11P38854 YPR077CYPR077C 372 nt3.08□□□□□ -1.92
TDA11P38854 PHO88YBR106W 567 nt3.08□□□□□ -1.92
TDA11P38854 OAF3YKR064W 2592 nt3.08□□□□□ -1.92
TDA11P38854 YDR089WYDR089W 2610 nt3.08□□□□□ -1.92
TDA11P38854 UBP5YER144C 2418 nt3.08□□□□□ -1.92
TDA11P38854 TFC4YGR047C 3078 nt3.07□□□□□ -1.92
TDA11P38854 RAD2YGR258C 3096 nt3.07□□□□□ -1.92
TDA11P38854 OPI6YDL096C 327 nt3.07□□□□□ -1.92
TDA11P38854 YIR014WYIR014W 729 nt3.07□□□□□ -1.92
TDA11P38854 SPO20YMR017W 1194 nt3.07□□□□□ -1.92
TDA11P38854 RPL13BYMR142C 600 nt3.07□□□□□ -1.92
TDA11P38854 VAM10YOR068C 345 nt3.07□□□□□ -1.92
TDA11P38854 DGA1YOR245C 1257 nt3.07□□□□□ -1.92
TDA11P38854 FKH2YNL068C 2589 nt3.07□□□□□ -1.92
TDA11P38854 STE24YJR117W 1362 nt3.07□□□□□ -1.92
TDA11P38854 TRM12YML005W 1389 nt3.07□□□□□ -1.92
TDA11P38854 PMR1YGL167C 2853 nt3.07□□□□□ -1.92
TDA11P38854 YPS6YIR039C 1614 nt3.07□□□□□ -1.92
TDA11P38854 TCP1YDR212W 1680 nt3.07□□□□□ -1.92
TDA11P38854 AEP3YPL005W 1821 nt3.07□□□□□ -1.92
TDA11P38854 AKR1YDR264C 2295 nt3.07□□□□□ -1.92
TDA11P38854 ACK1YDL203C 1872 nt3.06□□□□□ -1.92
TDA11P38854 YDL242WYDL242W 354 nt3.06□□□□□ -1.92
TDA11P38854 YGL041W-AYGL041W-A 465 nt3.06□□□□□ -1.92
TDA11P38854 MON1YGL124C 1935 nt3.06□□□□□ -1.92
TDA11P38854 YGL258W-AYGL258W-A 234 nt3.06□□□□□ -1.92
TDA11P38854 RPC37YKR025W 849 nt3.06□□□□□ -1.92
TDA11P38854 PBA1YLR199C 831 nt3.06□□□□□ -1.92
TDA11P38854 YOR073W-AYOR073W-A 234 nt3.06□□□□□ -1.92
TDA11P38854 INP52YNL106C 3552 nt3.06□□□□□ -1.92
TDA11P38854 YHR080CYHR080C 4038 nt3.05□□□□□ -1.92
TDA11P38854 SKN7YHR206W 1869 nt3.05□□□□□ -1.92
TDA11P38854 MOT1YPL082C 5604 nt3.05□□□□□ -1.92
TDA11P38854 ALG8YOR067C 1734 nt3.05□□□□□ -1.92
TDA11P38854 VPS30YPL120W 1674 nt3.05□□□□□ -1.92
TDA11P38854 DBP5YOR046C 1449 nt3.05□□□□□ -1.92
TDA11P38854 RSM23YGL129C 1353 nt3.05□□□□□ -1.92
TDA11P38854 TGL2YDR058C 981 nt3.05□□□□□ -1.92
TDA11P38854 YDR290WYDR290W 330 nt3.05□□□□□ -1.92
TDA11P38854 PAU10YDR542W 363 nt3.05□□□□□ -1.92
TDA11P38854 ISC10YER180C 804 nt3.05□□□□□ -1.92
TDA11P38854 LIF1YGL090W 1266 nt3.05□□□□□ -1.92
TDA11P38854 PAU11YGL261C 363 nt3.05□□□□□ -1.92
TDA11P38854 PAU13YHL046C 363 nt3.05□□□□□ -1.92
TDA11P38854 QCR10YHR001W-A 234 nt3.05□□□□□ -1.92
TDA11P38854 YIL156W-AYIL156W-A 402 nt3.05□□□□□ -1.92
TDA11P38854 EBP2YKL172W 1284 nt3.05□□□□□ -1.92
TDA11P38854 ECM4YKR076W 1113 nt3.05□□□□□ -1.92
TDA11P38854 PAU4YLR461W 363 nt3.05□□□□□ -1.92
TDA11P38854 RPS10BYMR230W 318 nt3.05□□□□□ -1.92
TDA11P38854 YPL107WYPL107W 747 nt3.05□□□□□ -1.92
TDA11P38854 SNQ2YDR011W 4506 nt3.05□□□□□ -1.92
TDA11P38854 ARG2YJL071W 1725 nt3.05□□□□□ -1.92
TDA11P38854 CCM1YGR150C 2595 nt3.05□□□□□ -1.92
TDA11P38854 ERG11YHR007C 1593 nt3.04□□□□□ -1.92
TDA11P38854 BNA4YBL098W 1383 nt3.04□□□□□ -1.92
TDA11P38854 YDL186WYDL186W 834 nt3.04□□□□□ -1.92
TDA11P38854 BSC2YDR275W 708 nt3.04□□□□□ -1.92
TDA11P38854 SPT2YER161C 1002 nt3.04□□□□□ -1.92
TDA11P38854 IME1YJR094C 1083 nt3.04□□□□□ -1.92
TDA11P38854 YLR363W-AYLR363W-A 258 nt3.04□□□□□ -1.92
TDA11P38854 RLP7YNL002C 969 nt3.04□□□□□ -1.92
TDA11P38854 RPC34YNR003C 954 nt3.04□□□□□ -1.92
TDA11P38854 HNT3YOR258W 654 nt3.04□□□□□ -1.92
TDA11P38854 YBR300CYBR300C 498 nt3.04□□□□□ -1.92
TDA11P38854 YCL001W-AYCL001W-A 462 nt3.04□□□□□ -1.92
TDA11P38854 CEP3YMR168C 1827 nt3.04□□□□□ -1.92
TDA11P38854 SHQ1YIL104C 1524 nt3.03□□□□□ -1.92
TDA11P38854 MSR1YHR091C 1932 nt3.03□□□□□ -1.92
TDA11P38854 KAP104YBR017C 2757 nt3.03□□□□□ -1.92
TDA11P38854 MGT1YDL200C 567 nt3.03□□□□□ -1.92
TDA11P38854 AGE2YIL044C 897 nt3.03□□□□□ -1.92
TDA11P38854 DAL2YIR029W 1032 nt3.03□□□□□ -1.92
TDA11P38854 TEX1YNL253W 1269 nt3.03□□□□□ -1.92
TDA11P38854 MUM2YBR057C 1101 nt3.03□□□□□ -1.92
TDA11P38854 YPR142CYPR142C 564 nt3.03□□□□□ -1.92
TDA11P38854 CET1YPL228W 1650 nt3.03□□□□□ -1.92
TDA11P38854 DNM1YLL001W 2274 nt3.03□□□□□ -1.92
TDA11P38854 CBP2YHL038C 1893 nt3.03□□□□□ -1.93
TDA11P38854 EXO5YBR163W 1758 nt3.02□□□□□ -1.93
TDA11P38854 COM2YER130C 1332 nt3.02□□□□□ -1.93
TDA11P38854 CLB3YDL155W 1284 nt3.02□□□□□ -1.93
TDA11P38854 tF(GAA)DtF(GAA)D 73 nt3.02□□□□□ -1.93
TDA11P38854 tF(GAA)NtF(GAA)N 73 nt3.02□□□□□ -1.93
TDA11P38854 APA2YDR530C 978 nt3.02□□□□□ -1.93
TDA11P38854 GPP2YER062C 753 nt3.02□□□□□ -1.93
TDA11P38854 TAN1YGL232W 870 nt3.02□□□□□ -1.93
TDA11P38854 TAM41YGR046W 1158 nt3.02□□□□□ -1.93
TDA11P38854 MAK16YAL025C 921 nt3.02□□□□□ -1.93
TDA11P38854 PCD1YLR151C 1023 nt3.02□□□□□ -1.93
TDA11P38854 YLR297WYLR297W 390 nt3.02□□□□□ -1.93
TDA11P38854 YMR122W-AYMR122W-A 255 nt3.02□□□□□ -1.93
TDA11P38854 YMR310CYMR310C 954 nt3.02□□□□□ -1.93
TDA11P38854 TUM1YOR251C 915 nt3.02□□□□□ -1.93
TDA11P38854 PBI1YPL272C 1554 nt3.02□□□□□ -1.93
TDA11P38854 ITC1YGL133W 3795 nt3.02□□□□□ -1.93
TDA11P38854 SPO14YKR031C 5052 nt3.01□□□□□ -1.93
TDA11P38854 SEC7YDR170C 6030 nt3.01□□□□□ -1.93
TDA11P38854 YOR365CYOR365C 2112 nt3.01□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms