Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.76■□□□□ 0.59
THBS4P35443 MIR5787-201ENST00000611784 55 ntBASIC18.76■□□□□ 0.59
THBS4P35443 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
THBS4P35443 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.76■□□□□ 0.59
THBS4P35443 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS4P35443 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
THBS4P35443 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.75■□□□□ 0.59
THBS4P35443 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.75■□□□□ 0.59
THBS4P35443 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS4P35443 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.75■□□□□ 0.59
THBS4P35443 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS4P35443 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 AC010542.4-201ENST00000563151 1910 ntBASIC18.74■□□□□ 0.59
THBS4P35443 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 AC007375.3-201ENST00000600936 2314 ntBASIC18.74■□□□□ 0.59
THBS4P35443 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS4P35443 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS4P35443 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
THBS4P35443 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS4P35443 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS4P35443 AC027612.3-201ENST00000413684 1047 ntBASIC18.74■□□□□ 0.59
THBS4P35443 YBX1P1-201ENST00000445822 960 ntBASIC18.74■□□□□ 0.59
THBS4P35443 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS4P35443 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS4P35443 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 OXCT2P1-201ENST00000447263 1535 ntBASIC18.74■□□□□ 0.59
THBS4P35443 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS4P35443 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.73■□□□□ 0.59
THBS4P35443 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS4P35443 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
THBS4P35443 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS4P35443 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
THBS4P35443 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.73■□□□□ 0.59
THBS4P35443 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS4P35443 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.73■□□□□ 0.59
THBS4P35443 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
THBS4P35443 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.73■□□□□ 0.59
THBS4P35443 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS4P35443 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS4P35443 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
THBS4P35443 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS4P35443 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.72■□□□□ 0.59
THBS4P35443 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.72■□□□□ 0.59
THBS4P35443 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
THBS4P35443 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS4P35443 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
THBS4P35443 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS4P35443 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
THBS4P35443 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
THBS4P35443 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.71■□□□□ 0.59
THBS4P35443 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.71■□□□□ 0.59
THBS4P35443 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS4P35443 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.71■□□□□ 0.59
THBS4P35443 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS4P35443 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS4P35443 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
THBS4P35443 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS4P35443 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
THBS4P35443 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.7■□□□□ 0.58
THBS4P35443 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.7■□□□□ 0.58
THBS4P35443 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 AC123595.1-201ENST00000440769 1046 ntBASIC18.7■□□□□ 0.58
THBS4P35443 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.7■□□□□ 0.58
THBS4P35443 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.7■□□□□ 0.58
THBS4P35443 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.7■□□□□ 0.58
THBS4P35443 FAM99A-202ENST00000538190 1989 ntBASIC18.7■□□□□ 0.58
THBS4P35443 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS4P35443 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS4P35443 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS4P35443 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
THBS4P35443 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms