Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.51■■□□□ 1.19
MMP8P22894 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.51■■□□□ 1.19
MMP8P22894 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.51■■□□□ 1.19
MMP8P22894 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.51■■□□□ 1.19
MMP8P22894 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 Z98882.1-201ENST00000622160 2253 ntBASIC22.51■■□□□ 1.19
MMP8P22894 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.51■■□□□ 1.19
MMP8P22894 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP8P22894 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
MMP8P22894 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.5■■□□□ 1.19
MMP8P22894 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP8P22894 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.5■■□□□ 1.19
MMP8P22894 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.5■■□□□ 1.19
MMP8P22894 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP8P22894 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.5■■□□□ 1.19
MMP8P22894 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP8P22894 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
MMP8P22894 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.5■■□□□ 1.19
MMP8P22894 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MMP8P22894 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.5■■□□□ 1.19
MMP8P22894 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.5■■□□□ 1.19
MMP8P22894 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MMP8P22894 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
MMP8P22894 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
MMP8P22894 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.49■■□□□ 1.19
MMP8P22894 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
MMP8P22894 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MMP8P22894 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.49■■□□□ 1.19
MMP8P22894 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.49■■□□□ 1.19
MMP8P22894 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.49■■□□□ 1.19
MMP8P22894 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
MMP8P22894 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.49■■□□□ 1.19
MMP8P22894 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
MMP8P22894 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.49■■□□□ 1.19
MMP8P22894 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MMP8P22894 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.49■■□□□ 1.19
MMP8P22894 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
MMP8P22894 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MMP8P22894 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MMP8P22894 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
MMP8P22894 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.48■■□□□ 1.19
MMP8P22894 AC005224.4-201ENST00000583262 1652 ntBASIC22.48■■□□□ 1.19
MMP8P22894 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.48■■□□□ 1.19
MMP8P22894 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.47■■□□□ 1.19
MMP8P22894 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.47■■□□□ 1.19
MMP8P22894 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
MMP8P22894 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 AC105265.2-201ENST00000467189 838 ntBASIC22.47■■□□□ 1.19
MMP8P22894 AL354811.1-201ENST00000610286 706 ntBASIC22.47■■□□□ 1.19
MMP8P22894 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.47■■□□□ 1.19
MMP8P22894 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.47■■□□□ 1.19
MMP8P22894 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MMP8P22894 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
MMP8P22894 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.46■■□□□ 1.19
MMP8P22894 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MMP8P22894 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
MMP8P22894 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
MMP8P22894 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 AL358852.1-201ENST00000623174 1268 ntBASIC22.45■■□□□ 1.18
MMP8P22894 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.45■■□□□ 1.18
MMP8P22894 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
MMP8P22894 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.45■■□□□ 1.18
MMP8P22894 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
MMP8P22894 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MMP8P22894 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP8P22894 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.44■■□□□ 1.18
MMP8P22894 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP8P22894 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP8P22894 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms