Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.85■■□□□ 1.09
SRFP11831 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.85■■□□□ 1.09
SRFP11831 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 AC010980.2-201ENST00000587099 1412 ntBASIC21.85■■□□□ 1.09
SRFP11831 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.85■■□□□ 1.09
SRFP11831 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SRFP11831 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRFP11831 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
SRFP11831 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SRFP11831 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRFP11831 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.84■■□□□ 1.09
SRFP11831 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SRFP11831 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.84■■□□□ 1.09
SRFP11831 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.84■■□□□ 1.09
SRFP11831 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
SRFP11831 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.84■■□□□ 1.09
SRFP11831 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SRFP11831 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SRFP11831 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.83■■□□□ 1.09
SRFP11831 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.09
SRFP11831 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SRFP11831 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.83■■□□□ 1.09
SRFP11831 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.83■■□□□ 1.09
SRFP11831 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SRFP11831 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.83■■□□□ 1.09
SRFP11831 AL591742.1-201ENST00000604433 565 ntBASIC21.83■■□□□ 1.09
SRFP11831 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRFP11831 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SRFP11831 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SRFP11831 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SRFP11831 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.82■■□□□ 1.08
SRFP11831 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 POU5F1P4-201ENST00000413175 1085 ntBASIC21.82■■□□□ 1.08
SRFP11831 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 AC026366.1-201ENST00000488803 879 ntBASIC21.82■■□□□ 1.08
SRFP11831 UNC93B4-201ENST00000505679 747 ntBASIC21.82■■□□□ 1.08
SRFP11831 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SRFP11831 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.82■■□□□ 1.08
SRFP11831 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.82■■□□□ 1.08
SRFP11831 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SRFP11831 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.82■■□□□ 1.08
SRFP11831 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.82■■□□□ 1.08
SRFP11831 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SRFP11831 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRFP11831 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SRFP11831 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.81■■□□□ 1.08
SRFP11831 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SRFP11831 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRFP11831 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.81■■□□□ 1.08
SRFP11831 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SRFP11831 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.81■■□□□ 1.08
SRFP11831 UNC93B5-201ENST00000530315 699 ntBASIC21.81■■□□□ 1.08
SRFP11831 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.81■■□□□ 1.08
SRFP11831 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.81■■□□□ 1.08
SRFP11831 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRFP11831 AC020928.2-201ENST00000588717 2197 ntBASIC21.81■■□□□ 1.08
SRFP11831 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 LINC00526-201ENST00000581067 1875 ntBASIC21.8■■□□□ 1.08
SRFP11831 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.8■■□□□ 1.08
SRFP11831 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.8■■□□□ 1.08
SRFP11831 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.8■■□□□ 1.08
SRFP11831 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.8■■□□□ 1.08
SRFP11831 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRFP11831 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.8■■□□□ 1.08
SRFP11831 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SRFP11831 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms