Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBL4AP11441 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.69■□□□□ 0.74
UBL4AP11441 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBL4AP11441 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
UBL4AP11441 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UBL4AP11441 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.68■□□□□ 0.74
UBL4AP11441 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.68■□□□□ 0.74
UBL4AP11441 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBL4AP11441 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UBL4AP11441 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
UBL4AP11441 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 PKD1P6-201ENST00000343738 4769 ntBASIC19.67■□□□□ 0.74
UBL4AP11441 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.67■□□□□ 0.74
UBL4AP11441 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBL4AP11441 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBL4AP11441 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.67■□□□□ 0.74
UBL4AP11441 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.67■□□□□ 0.74
UBL4AP11441 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
UBL4AP11441 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
UBL4AP11441 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBL4AP11441 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.67■□□□□ 0.74
UBL4AP11441 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.67■□□□□ 0.74
UBL4AP11441 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 MIR638-201ENST00000385237 100 ntBASIC19.66■□□□□ 0.74
UBL4AP11441 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.66■□□□□ 0.74
UBL4AP11441 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.66■□□□□ 0.74
UBL4AP11441 AC105233.4-201ENST00000642045 216 ntBASIC19.66■□□□□ 0.74
UBL4AP11441 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.66■□□□□ 0.74
UBL4AP11441 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.66■□□□□ 0.74
UBL4AP11441 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.66■□□□□ 0.74
UBL4AP11441 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBL4AP11441 FBXW4P1-201ENST00000426721 2239 ntBASIC19.66■□□□□ 0.74
UBL4AP11441 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 MIR572-201ENST00000384983 95 ntBASIC19.65■□□□□ 0.74
UBL4AP11441 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.65■□□□□ 0.74
UBL4AP11441 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.65■□□□□ 0.74
UBL4AP11441 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBL4AP11441 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBL4AP11441 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBL4AP11441 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBL4AP11441 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBL4AP11441 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBL4AP11441 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.64■□□□□ 0.73
UBL4AP11441 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.64■□□□□ 0.73
UBL4AP11441 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.64■□□□□ 0.73
UBL4AP11441 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UBL4AP11441 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.64■□□□□ 0.73
UBL4AP11441 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
UBL4AP11441 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBL4AP11441 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBL4AP11441 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBL4AP11441 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBL4AP11441 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBL4AP11441 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBL4AP11441 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.63■□□□□ 0.73
UBL4AP11441 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
UBL4AP11441 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBL4AP11441 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBL4AP11441 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.63■□□□□ 0.73
UBL4AP11441 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.63■□□□□ 0.73
UBL4AP11441 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBL4AP11441 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBL4AP11441 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.63■□□□□ 0.73
UBL4AP11441 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms