Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
THRAP10827 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.32■■□□□ 1
THRAP10827 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
THRAP10827 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.32■■□□□ 1
THRAP10827 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.31■■□□□ 1
THRAP10827 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.31■■□□□ 1
THRAP10827 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.31■■□□□ 1
THRAP10827 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.31■■□□□ 1
THRAP10827 AC123595.1-201ENST00000440769 1046 ntBASIC21.31■■□□□ 1
THRAP10827 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 MIR6084-201ENST00000622012 110 ntBASIC21.31■■□□□ 1
THRAP10827 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.31■■□□□ 1
THRAP10827 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.31■■□□□ 1
THRAP10827 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
THRAP10827 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
THRAP10827 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.3■■□□□ 1
THRAP10827 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.3■■□□□ 1
THRAP10827 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
THRAP10827 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.3■■□□□ 1
THRAP10827 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.3■■□□□ 1
THRAP10827 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.3■■□□□ 1
THRAP10827 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.3■■□□□ 1
THRAP10827 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
THRAP10827 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.3■■□□□ 1
THRAP10827 AP005435.1-201ENST00000529293 1178 ntBASIC21.3■■□□□ 1
THRAP10827 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.3■■□□□ 1
THRAP10827 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
THRAP10827 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.3■■□□□ 1
THRAP10827 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.29■■□□□ 1
THRAP10827 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.29■■□□□ 1
THRAP10827 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.29■■□□□ 1
THRAP10827 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 DUX4L2-201ENST00000561772 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.29■■□□□ 1
THRAP10827 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 DUX4L6-201ENST00000626483 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4L1-201ENST00000627662 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4L8-201ENST00000629013 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4L3-201ENST00000630187 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4L7-201ENST00000630678 1275 ntBASIC21.29■■□□□ 1
THRAP10827 DUX4L5-201ENST00000630834 1275 ntBASIC21.29■■□□□ 1
THRAP10827 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
THRAP10827 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
THRAP10827 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
THRAP10827 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.28■■□□□ 1
THRAP10827 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
THRAP10827 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
THRAP10827 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.28■■□□□ 1
THRAP10827 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.28■■□□□ 1
THRAP10827 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
THRAP10827 FAM99A-202ENST00000538190 1989 ntBASIC21.28■■□□□ 1
THRAP10827 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.28■■□□□ 1
THRAP10827 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.28■■□□□ 1
THRAP10827 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
THRAP10827 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.27■■□□□ 1
THRAP10827 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.27■■□□□ 1
THRAP10827 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
THRAP10827 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
THRAP10827 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.27■■□□□ 1
THRAP10827 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.27■■□□□ 1
THRAP10827 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.27■■□□□ 1
THRAP10827 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.27■■□□□ 1
THRAP10827 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
THRAP10827 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
THRAP10827 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
THRAP10827 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.26■□□□□ 0.99
THRAP10827 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
THRAP10827 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THRAP10827 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THRAP10827 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
THRAP10827 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.26■□□□□ 0.99
THRAP10827 KRT18P5-201ENST00000436075 1291 ntBASIC21.26■□□□□ 0.99
THRAP10827 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.26■□□□□ 0.99
THRAP10827 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms