Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.53■□□□□ 0.88
CCNYL3P0C7X3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 EP400NL-214ENST00000641289 2402 ntBASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 BID-214ENST00000617586 542 ntTSL 5 BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.52■□□□□ 0.88
CCNYL3P0C7X3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.52■□□□□ 0.87
CCNYL3P0C7X3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 KRT18P61-201ENST00000585825 1298 ntBASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNYL3P0C7X3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 KRT18P11-201ENST00000435214 1283 ntBASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCNYL3P0C7X3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 AL024507.2-201ENST00000606070 2574 ntBASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 AC009237.3-201ENST00000393279 1427 ntBASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.49■□□□□ 0.87
CCNYL3P0C7X3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNYL3P0C7X3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCNYL3P0C7X3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 LINC00526-201ENST00000581067 1875 ntBASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 AC026185.1-201ENST00000445748 174 ntBASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms