Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CD74P04233 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CD74P04233 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 AP005212.1-201ENST00000581547 1997 ntBASIC17.93■□□□□ 0.46
CD74P04233 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CD74P04233 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.93■□□□□ 0.46
CD74P04233 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.93■□□□□ 0.46
CD74P04233 AC010980.1-201ENST00000587192 1142 ntBASIC17.93■□□□□ 0.46
CD74P04233 HSD17B1P1-201ENST00000590052 955 ntBASIC17.93■□□□□ 0.46
CD74P04233 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.93■□□□□ 0.46
CD74P04233 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.93■□□□□ 0.46
CD74P04233 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD74P04233 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CD74P04233 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.92■□□□□ 0.46
CD74P04233 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CD74P04233 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.92■□□□□ 0.46
CD74P04233 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.92■□□□□ 0.46
CD74P04233 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CD74P04233 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.92■□□□□ 0.46
CD74P04233 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD74P04233 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.92■□□□□ 0.46
CD74P04233 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD74P04233 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
CD74P04233 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CD74P04233 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD74P04233 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.91■□□□□ 0.46
CD74P04233 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
CD74P04233 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.91■□□□□ 0.46
CD74P04233 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD74P04233 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD74P04233 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD74P04233 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD74P04233 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.9■□□□□ 0.46
CD74P04233 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD74P04233 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD74P04233 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD74P04233 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD74P04233 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CD74P04233 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD74P04233 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CD74P04233 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.89■□□□□ 0.45
CD74P04233 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CD74P04233 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.89■□□□□ 0.45
CD74P04233 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.89■□□□□ 0.45
CD74P04233 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.89■□□□□ 0.45
CD74P04233 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD74P04233 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CD74P04233 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.89■□□□□ 0.45
CD74P04233 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD74P04233 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 AL391422.3-201ENST00000603791 2761 ntBASIC17.88■□□□□ 0.45
CD74P04233 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.88■□□□□ 0.45
CD74P04233 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms