Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.52□□□□□ -0.25
APOBP04114 AP003097.1-201ENST00000530657 1135 ntBASIC13.52□□□□□ -0.25
APOBP04114 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.52□□□□□ -0.25
APOBP04114 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
APOBP04114 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.52□□□□□ -0.25
APOBP04114 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.52□□□□□ -0.25
APOBP04114 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
APOBP04114 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBP04114 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBP04114 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOBP04114 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBP04114 AL445228.2-201ENST00000605589 952 ntBASIC13.51□□□□□ -0.25
APOBP04114 LINC01023-201ENST00000606054 436 ntBASIC13.51□□□□□ -0.25
APOBP04114 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBP04114 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 AC004812.2-201ENST00000611079 2094 ntBASIC13.51□□□□□ -0.25
APOBP04114 RBM17P2-201ENST00000616397 1405 ntBASIC13.51□□□□□ -0.25
APOBP04114 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
APOBP04114 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 AP003733.4-201ENST00000623785 1697 ntBASIC13.51□□□□□ -0.25
APOBP04114 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOBP04114 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBP04114 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBP04114 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBP04114 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 UBE2SP1-201ENST00000450587 669 ntBASIC13.5□□□□□ -0.25
APOBP04114 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBP04114 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APOBP04114 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBP04114 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APOBP04114 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBP04114 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.49□□□□□ -0.25
APOBP04114 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.49□□□□□ -0.25
APOBP04114 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.49□□□□□ -0.25
APOBP04114 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBP04114 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBP04114 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 KRT17P1-201ENST00000399211 1546 ntBASIC13.49□□□□□ -0.25
APOBP04114 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBP04114 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBP04114 C1QBPP2-201ENST00000528754 825 ntBASIC13.48□□□□□ -0.25
APOBP04114 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBP04114 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBP04114 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 AP006587.3-201ENST00000525742 1516 ntBASIC13.48□□□□□ -0.25
APOBP04114 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 AC010980.2-201ENST00000587099 1412 ntBASIC13.48□□□□□ -0.25
APOBP04114 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBP04114 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBP04114 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBP04114 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APOBP04114 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOBP04114 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBP04114 MIR718-201ENST00000390190 70 ntBASIC13.47□□□□□ -0.25
APOBP04114 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBP04114 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms