Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND1P03886 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-ND1P03886 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND1P03886 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MT-ND1P03886 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MT-ND1P03886 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND1P03886 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-ND1P03886 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-ND1P03886 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
MT-ND1P03886 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND1P03886 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND1P03886 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND1P03886 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-ND1P03886 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
MT-ND1P03886 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND1P03886 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
MT-ND1P03886 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 AL121603.2-201ENST00000557373 2117 ntBASIC20.05■□□□□ 0.8
MT-ND1P03886 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND1P03886 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
MT-ND1P03886 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND1P03886 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND1P03886 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
MT-ND1P03886 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND1P03886 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND1P03886 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.04■□□□□ 0.8
MT-ND1P03886 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
MT-ND1P03886 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.04■□□□□ 0.8
MT-ND1P03886 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND1P03886 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND1P03886 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND1P03886 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-ND1P03886 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND1P03886 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND1P03886 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND1P03886 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
MT-ND1P03886 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 C17orf82-201ENST00000623772 1530 ntBASIC20.02■□□□□ 0.8
MT-ND1P03886 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.02■□□□□ 0.8
MT-ND1P03886 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.02■□□□□ 0.8
MT-ND1P03886 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.02■□□□□ 0.8
MT-ND1P03886 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND1P03886 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MT-ND1P03886 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MT-ND1P03886 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MT-ND1P03886 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MT-ND1P03886 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.01■□□□□ 0.79
MT-ND1P03886 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.01■□□□□ 0.79
MT-ND1P03886 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND1P03886 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 MIR6724-1-201ENST00000616420 92 ntBASIC20■□□□□ 0.79
MT-ND1P03886 MIR6724-2-201ENST00000616483 92 ntBASIC20■□□□□ 0.79
MT-ND1P03886 MIR6724-4-201ENST00000617390 92 ntBASIC20■□□□□ 0.79
MT-ND1P03886 MIR6724-3-201ENST00000622482 92 ntBASIC20■□□□□ 0.79
MT-ND1P03886 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MT-ND1P03886 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MT-ND1P03886 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND1P03886 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MT-ND1P03886 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms