Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.38■■□□□ 1.33
TIMP1P01033 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.38■■□□□ 1.33
TIMP1P01033 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.38■■□□□ 1.33
TIMP1P01033 UNC93B5-201ENST00000530315 699 ntBASIC23.38■■□□□ 1.33
TIMP1P01033 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.38■■□□□ 1.33
TIMP1P01033 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TIMP1P01033 OR7E47P-201ENST00000546390 1422 ntBASIC23.38■■□□□ 1.33
TIMP1P01033 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.38■■□□□ 1.33
TIMP1P01033 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.37■■□□□ 1.33
TIMP1P01033 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TIMP1P01033 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
TIMP1P01033 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 AC073648.6-201ENST00000641589 218 ntBASIC23.37■■□□□ 1.33
TIMP1P01033 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
TIMP1P01033 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TIMP1P01033 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.36■■□□□ 1.33
TIMP1P01033 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TIMP1P01033 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TIMP1P01033 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
TIMP1P01033 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.36■■□□□ 1.33
TIMP1P01033 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.36■■□□□ 1.33
TIMP1P01033 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.36■■□□□ 1.33
TIMP1P01033 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.36■■□□□ 1.33
TIMP1P01033 AL591742.1-201ENST00000604433 565 ntBASIC23.36■■□□□ 1.33
TIMP1P01033 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TIMP1P01033 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TIMP1P01033 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TIMP1P01033 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TIMP1P01033 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TIMP1P01033 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TIMP1P01033 LINC01960-201ENST00000563759 1884 ntBASIC23.35■■□□□ 1.33
TIMP1P01033 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TIMP1P01033 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.35■■□□□ 1.33
TIMP1P01033 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.35■■□□□ 1.33
TIMP1P01033 AC008550.1-201ENST00000511500 884 ntBASIC23.35■■□□□ 1.33
TIMP1P01033 AC008175.2-201ENST00000612840 297 ntBASIC23.35■■□□□ 1.33
TIMP1P01033 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TIMP1P01033 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.35■■□□□ 1.33
TIMP1P01033 ABCB10P4-201ENST00000566803 2184 ntBASIC23.35■■□□□ 1.33
TIMP1P01033 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TIMP1P01033 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.35■■□□□ 1.33
TIMP1P01033 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 AP006587.3-201ENST00000525742 1516 ntBASIC23.34■■□□□ 1.33
TIMP1P01033 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TIMP1P01033 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.34■■□□□ 1.33
TIMP1P01033 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.34■■□□□ 1.33
TIMP1P01033 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.34■■□□□ 1.33
TIMP1P01033 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.34■■□□□ 1.33
TIMP1P01033 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.34■■□□□ 1.33
TIMP1P01033 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.34■■□□□ 1.33
TIMP1P01033 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TIMP1P01033 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TIMP1P01033 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.33■■□□□ 1.33
TIMP1P01033 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.33■■□□□ 1.33
TIMP1P01033 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TIMP1P01033 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.33■■□□□ 1.33
TIMP1P01033 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.33■■□□□ 1.33
TIMP1P01033 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.33■■□□□ 1.33
TIMP1P01033 AP003097.1-201ENST00000530657 1135 ntBASIC23.33■■□□□ 1.33
TIMP1P01033 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TIMP1P01033 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TIMP1P01033 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TIMP1P01033 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 UBE2SP1-201ENST00000450587 669 ntBASIC23.32■■□□□ 1.32
TIMP1P01033 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.32■■□□□ 1.32
TIMP1P01033 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.32■■□□□ 1.32
TIMP1P01033 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.32■■□□□ 1.32
TIMP1P01033 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIMP1P01033 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TIMP1P01033 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.31■■□□□ 1.32
TIMP1P01033 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TIMP1P01033 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TIMP1P01033 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.31■■□□□ 1.32
TIMP1P01033 POU5F1P4-201ENST00000413175 1085 ntBASIC23.31■■□□□ 1.32
TIMP1P01033 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms