Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.9■□□□□ 0.62
CNOT4O95628 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT4O95628 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.9■□□□□ 0.62
CNOT4O95628 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNOT4O95628 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.9■□□□□ 0.62
CNOT4O95628 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT4O95628 AC079140.4-201ENST00000507448 529 ntBASIC18.9■□□□□ 0.62
CNOT4O95628 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.9■□□□□ 0.62
CNOT4O95628 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.9■□□□□ 0.62
CNOT4O95628 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.9■□□□□ 0.62
CNOT4O95628 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.9■□□□□ 0.62
CNOT4O95628 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.9■□□□□ 0.62
CNOT4O95628 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT4O95628 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT4O95628 AC055733.4-201ENST00000638462 1354 ntBASIC18.9■□□□□ 0.62
CNOT4O95628 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNOT4O95628 C9orf163-202ENST00000624034 2573 ntBASIC18.89■□□□□ 0.62
CNOT4O95628 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT4O95628 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CNOT4O95628 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.89■□□□□ 0.61
CNOT4O95628 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CNOT4O95628 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.89■□□□□ 0.61
CNOT4O95628 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNOT4O95628 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNOT4O95628 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.89■□□□□ 0.61
CNOT4O95628 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CNOT4O95628 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.89■□□□□ 0.61
CNOT4O95628 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CNOT4O95628 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT4O95628 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT4O95628 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CNOT4O95628 C1orf229-201ENST00000623686 2258 ntBASIC18.88■□□□□ 0.61
CNOT4O95628 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT4O95628 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT4O95628 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNOT4O95628 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT4O95628 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CNOT4O95628 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CNOT4O95628 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CNOT4O95628 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT4O95628 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
CNOT4O95628 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT4O95628 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.87■□□□□ 0.61
CNOT4O95628 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT4O95628 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CNOT4O95628 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CNOT4O95628 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.87■□□□□ 0.61
CNOT4O95628 KRT87P-202ENST00000534226 1464 ntBASIC18.87■□□□□ 0.61
CNOT4O95628 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT4O95628 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT4O95628 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT4O95628 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT4O95628 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT4O95628 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT4O95628 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 KRT19P1-201ENST00000405746 1186 ntBASIC18.86■□□□□ 0.61
CNOT4O95628 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.86■□□□□ 0.61
CNOT4O95628 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.86■□□□□ 0.61
CNOT4O95628 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CNOT4O95628 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT4O95628 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNOT4O95628 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT4O95628 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT4O95628 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT4O95628 AP006587.3-201ENST00000525742 1516 ntBASIC18.85■□□□□ 0.61
CNOT4O95628 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms