Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
RAPGEF3O95398 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC32.51■■■□□ 2.79
RAPGEF3O95398 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC32.51■■■□□ 2.79
RAPGEF3O95398 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
RAPGEF3O95398 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RAPGEF3O95398 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC32.51■■■□□ 2.79
RAPGEF3O95398 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC32.5■■■□□ 2.79
RAPGEF3O95398 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
RAPGEF3O95398 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF3O95398 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC32.5■■■□□ 2.79
RAPGEF3O95398 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC32.5■■■□□ 2.79
RAPGEF3O95398 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.49■■■□□ 2.79
RAPGEF3O95398 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
RAPGEF3O95398 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
RAPGEF3O95398 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.49■■■□□ 2.79
RAPGEF3O95398 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC32.49■■■□□ 2.79
RAPGEF3O95398 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.49■■■□□ 2.79
RAPGEF3O95398 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
RAPGEF3O95398 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RAPGEF3O95398 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC32.48■■■□□ 2.79
RAPGEF3O95398 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RAPGEF3O95398 SNORA78-201ENST00000459373 127 ntBASIC32.48■■■□□ 2.79
RAPGEF3O95398 RPPH1-201ENST00000516869 333 ntBASIC32.48■■■□□ 2.79
RAPGEF3O95398 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RAPGEF3O95398 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RAPGEF3O95398 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF3O95398 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF3O95398 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF3O95398 KRT18P21-201ENST00000515767 1272 ntBASIC32.47■■■□□ 2.79
RAPGEF3O95398 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.47■■■□□ 2.79
RAPGEF3O95398 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF3O95398 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC32.47■■■□□ 2.79
RAPGEF3O95398 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RAPGEF3O95398 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC32.46■■■□□ 2.79
RAPGEF3O95398 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RAPGEF3O95398 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC32.45■■■□□ 2.79
RAPGEF3O95398 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
RAPGEF3O95398 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
RAPGEF3O95398 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RAPGEF3O95398 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RAPGEF3O95398 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RAPGEF3O95398 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC32.44■■■□□ 2.78
RAPGEF3O95398 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
RAPGEF3O95398 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC32.44■■■□□ 2.78
RAPGEF3O95398 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
RAPGEF3O95398 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC32.44■■■□□ 2.78
RAPGEF3O95398 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.43■■■□□ 2.78
RAPGEF3O95398 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 RPS20-210ENST00000523936 899 ntTSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 AL162412.1-201ENST00000567129 965 ntBASIC32.43■■■□□ 2.78
RAPGEF3O95398 LINC01023-201ENST00000606054 436 ntBASIC32.43■■■□□ 2.78
RAPGEF3O95398 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RAPGEF3O95398 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.43■■■□□ 2.78
RAPGEF3O95398 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 AC079089.2-201ENST00000531211 1277 ntBASIC32.42■■■□□ 2.78
RAPGEF3O95398 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF3O95398 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
RAPGEF3O95398 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC32.41■■■□□ 2.78
RAPGEF3O95398 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.41■■■□□ 2.78
RAPGEF3O95398 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 C1QBPP2-201ENST00000528754 825 ntBASIC32.41■■■□□ 2.78
RAPGEF3O95398 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.41■■■□□ 2.78
RAPGEF3O95398 AL591742.1-201ENST00000604433 565 ntBASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms