Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 DUX4L4-201ENST00000566884 1269 ntBASIC17.37■□□□□ 0.37
SCAF4O95104 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAF4O95104 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SCAF4O95104 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAF4O95104 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.36■□□□□ 0.37
SCAF4O95104 MTDHP2-201ENST00000601468 714 ntBASIC17.36■□□□□ 0.37
SCAF4O95104 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCAF4O95104 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SCAF4O95104 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAF4O95104 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAF4O95104 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCAF4O95104 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAF4O95104 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SCAF4O95104 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAF4O95104 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCAF4O95104 UNC93B8-201ENST00000511903 705 ntBASIC17.35■□□□□ 0.37
SCAF4O95104 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAF4O95104 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAF4O95104 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCAF4O95104 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAF4O95104 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
SCAF4O95104 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAF4O95104 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.34■□□□□ 0.37
SCAF4O95104 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SCAF4O95104 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SCAF4O95104 KRT16P3-201ENST00000439127 1283 ntBASIC17.34■□□□□ 0.37
SCAF4O95104 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCAF4O95104 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.34■□□□□ 0.37
SCAF4O95104 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.34■□□□□ 0.37
SCAF4O95104 AC007952.6-201ENST00000573168 2673 ntBASIC17.34■□□□□ 0.37
SCAF4O95104 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAF4O95104 AC003957.1-201ENST00000625108 2673 ntBASIC17.34■□□□□ 0.37
SCAF4O95104 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAF4O95104 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAF4O95104 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAF4O95104 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
SCAF4O95104 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SCAF4O95104 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.33■□□□□ 0.37
SCAF4O95104 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAF4O95104 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SCAF4O95104 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.33■□□□□ 0.36
SCAF4O95104 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.33■□□□□ 0.36
SCAF4O95104 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCAF4O95104 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms