Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM3O75382 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRIM3O75382 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM3O75382 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM3O75382 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM3O75382 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM3O75382 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM3O75382 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.81■□□□□ 0.76
TRIM3O75382 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM3O75382 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM3O75382 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM3O75382 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM3O75382 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
TRIM3O75382 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM3O75382 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM3O75382 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM3O75382 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM3O75382 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM3O75382 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM3O75382 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRIM3O75382 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM3O75382 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRIM3O75382 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM3O75382 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM3O75382 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM3O75382 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.79■□□□□ 0.76
TRIM3O75382 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM3O75382 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM3O75382 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM3O75382 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM3O75382 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM3O75382 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.78■□□□□ 0.76
TRIM3O75382 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM3O75382 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 AC079089.2-201ENST00000531211 1277 ntBASIC19.78■□□□□ 0.76
TRIM3O75382 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.78■□□□□ 0.76
TRIM3O75382 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.78■□□□□ 0.76
TRIM3O75382 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM3O75382 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM3O75382 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM3O75382 LINC02228-203ENST00000641970 1355 ntBASIC19.78■□□□□ 0.76
TRIM3O75382 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM3O75382 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM3O75382 BX005040.4-201ENST00000637145 1518 ntBASIC19.77■□□□□ 0.76
TRIM3O75382 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM3O75382 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM3O75382 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM3O75382 AC034268.1-201ENST00000441047 882 ntBASIC19.77■□□□□ 0.76
TRIM3O75382 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM3O75382 TPRG1LP1-201ENST00000598702 760 ntBASIC19.77■□□□□ 0.76
TRIM3O75382 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.77■□□□□ 0.76
TRIM3O75382 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.77■□□□□ 0.75
TRIM3O75382 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM3O75382 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM3O75382 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms