Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.33■□□□□ 0.85
LRIT2A6NDA9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
LRIT2A6NDA9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
LRIT2A6NDA9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRIT2A6NDA9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRIT2A6NDA9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRIT2A6NDA9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.32■□□□□ 0.84
LRIT2A6NDA9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIT2A6NDA9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 AC019069.1-201ENST00000610008 1333 ntBASIC20.31■□□□□ 0.84
LRIT2A6NDA9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT2A6NDA9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 AC123595.1-201ENST00000440769 1046 ntBASIC20.3■□□□□ 0.84
LRIT2A6NDA9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT2A6NDA9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 YBX1P1-201ENST00000445822 960 ntBASIC20.29■□□□□ 0.84
LRIT2A6NDA9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
LRIT2A6NDA9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 LINC02228-203ENST00000641970 1355 ntBASIC20.29■□□□□ 0.84
LRIT2A6NDA9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT2A6NDA9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT2A6NDA9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT2A6NDA9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.27■□□□□ 0.84
LRIT2A6NDA9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LRIT2A6NDA9 AC244015.2-201ENST00000616358 1861 ntBASIC20.27■□□□□ 0.84
LRIT2A6NDA9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms