Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 AC008403.3-201ENST00000598924 454 ntBASIC20.64■□□□□ 0.89
CNOT1A5YKK6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 AC010980.2-201ENST00000587099 1412 ntBASIC20.64■□□□□ 0.89
CNOT1A5YKK6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CNOT1A5YKK6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 AL353803.4-201ENST00000565882 1934 ntBASIC20.62■□□□□ 0.89
CNOT1A5YKK6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNOT1A5YKK6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 C1QBPP2-201ENST00000528754 825 ntBASIC20.61■□□□□ 0.89
CNOT1A5YKK6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 CYP2T3P-201ENST00000601990 817 ntBASIC20.61■□□□□ 0.89
CNOT1A5YKK6 AC097493.4-201ENST00000641197 219 ntBASIC20.61■□□□□ 0.89
CNOT1A5YKK6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT1A5YKK6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT1A5YKK6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 RCN1P1-201ENST00000400413 996 ntBASIC20.59■□□□□ 0.89
CNOT1A5YKK6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.59■□□□□ 0.89
CNOT1A5YKK6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT1A5YKK6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 RN7SL850P-201ENST00000579959 291 ntBASIC20.58■□□□□ 0.89
CNOT1A5YKK6 FAM197Y4-202ENST00000622692 608 ntBASIC20.58■□□□□ 0.89
CNOT1A5YKK6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNOT1A5YKK6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms