Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 AC073314.1-201ENST00000568729 2216 ntBASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV3S1A0A5B6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 MIR4508-201ENST00000584178 70 ntBASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 AC010980.1-201ENST00000587192 1142 ntBASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV3S1A0A5B6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TCRBV3S1A0A5B6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV3S1A0A5B6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV3S1A0A5B6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms