Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 UBE2DNL-204ENST00000602536 740 ntBASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SMIM28A0A1B0GU29 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SMIM28A0A1B0GU29 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMIM28A0A1B0GU29 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 MFSD11-216ENST00000590393 1141 ntBASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMIM28A0A1B0GU29 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.96■■□□□ 1.27
SMIM28A0A1B0GU29 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 KRT18P20-201ENST00000548986 1279 ntBASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 AC003102.1-202ENST00000563394 1796 ntBASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMIM28A0A1B0GU29 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 AC026185.1-201ENST00000445748 174 ntBASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 MYCNOS-205ENST00000641950 531 ntBASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 AC068473.5-201ENST00000616428 2072 ntBASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 AC026471.6-201ENST00000622954 1905 ntBASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.94■■□□□ 1.26
SMIM28A0A1B0GU29 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMIM28A0A1B0GU29 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms