Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 AC010542.4-201ENST00000563151 1910 ntBASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 UNC93B3-201ENST00000308076 687 ntBASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 AC008406.3-201ENST00000620001 1374 ntBASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV4A0A0B4J268 AC092667.1-201ENST00000434301 2586 ntBASIC15.33■□□□□ 0.05
TRAV4A0A0B4J268 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV4A0A0B4J268 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV4A0A0B4J268 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 BX842568.3-201ENST00000418104 571 ntBASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV4A0A0B4J268 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 MIR4767-201ENST00000582827 78 ntBASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 AL136162.1-201ENST00000607711 1078 ntBASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV4A0A0B4J268 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 AC007375.3-201ENST00000600936 2314 ntBASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV4A0A0B4J268 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV4A0A0B4J268 AL391422.3-201ENST00000603791 2761 ntBASIC15.3■□□□□ 0.04
TRAV4A0A0B4J268 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV4A0A0B4J268 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV4A0A0B4J268 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms