Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav16A0A075B653 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Cap2-205ENSMUST00000225824 1634 ntBASIC14.55□□□□□ -0.08
Trav16A0A075B653 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16A0A075B653 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.54□□□□□ -0.08
Trav16A0A075B653 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav16A0A075B653 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16A0A075B653 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16A0A075B653 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.52□□□□□ -0.08
Trav16A0A075B653 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16A0A075B653 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav16A0A075B653 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.52□□□□□ -0.09
Trav16A0A075B653 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.52□□□□□ -0.09
Trav16A0A075B653 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16A0A075B653 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.51□□□□□ -0.09
Trav16A0A075B653 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.51□□□□□ -0.09
Trav16A0A075B653 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16A0A075B653 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms