Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 Z97353.1-201ENST00000422915 578 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 HSPB1-202ENST00000429938 527 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AL355309.1-201ENST00000442158 78 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AOAH-IT1-201ENST00000449672 573 ntTSL 4 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC245595.1-201ENST00000452399 549 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CYCSP8-201ENST00000455007 312 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RPS18-233ENST00000474973 589 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SFTPC-206ENST00000522109 921 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC011595.2-201ENST00000546640 1110 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC007533.1-201ENST00000564739 870 ntTSL 3 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC005154.1-231ENST00000583664 431 ntTSL 4 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 LINC01517-202ENST00000611112 539 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CAMK2G-201ENST00000305762 1820 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 ACTR8-201ENST00000335754 3629 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 TCP11-226ENST00000512012 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC096636.1-201ENST00000625140 3618 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 ZNF391-201ENST00000244576 4079 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 ATP9B-203ENST00000458297 1507 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 GPATCH1-201ENST00000170564 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 FNBP1P1-201ENST00000551203 1994 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 HP-203ENST00000357763 1482 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 FPGT-TNNI3K-206ENST00000557284 2855 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 RBM23-202ENST00000346528 2361 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 CUL2-203ENST00000374749 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 ELOVL3-201ENST00000370005 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 DNM1L-230ENST00000553257 2699 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 Metazoa_SRP.1-201ENST00000360440 343 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 CRABP2-203ENST00000368222 992 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 STOML3-201ENST00000379631 2121 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL136531.1-201ENST00000412497 480 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 NME6-202ENST00000415053 913 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL772202.1-201ENST00000421482 391 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL158201.1-201ENST00000426382 1248 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 LINC01621-201ENST00000438797 481 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC139143.1-201ENST00000441772 1207 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL390730.2-201ENST00000441773 674 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL359504.1-201ENST00000448052 493 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC072022.2-201ENST00000449623 672 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC079944.2-201ENST00000478867 734 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL158801.1-201ENST00000488313 348 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC084866.1-201ENST00000508955 554 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC100830.3-201ENST00000583044 554 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 MIR4294-201ENST00000584548 76 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 AC022966.1-201ENST00000591685 593 ntBASIC12.21□□□□□ -0.45
LMO3Q8TAP4 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 DHRS4-AS1-205ENST00000556379 2852 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO3Q8TAP4 TP53TG3D-202ENST00000398664 2029 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 TP53TG3-201ENST00000398682 2031 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 TP53TG3C-202ENST00000561509 2029 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 TP53TG3F-202ENST00000623042 2031 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 NXF5-207ENST00000537026 1991 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms