Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 YBX1P1-201ENST00000445822 960 ntBASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.65■■□□□ 1.06
RAI2Q9Y5P3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
RAI2Q9Y5P3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RAI2Q9Y5P3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAI2Q9Y5P3 AC005224.4-201ENST00000583262 1652 ntBASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 AC123595.1-201ENST00000440769 1046 ntBASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 FAM99A-202ENST00000538190 1989 ntBASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAI2Q9Y5P3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 LINC02228-203ENST00000641970 1355 ntBASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 C11orf96-202ENST00000528572 1834 ntBASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
RAI2Q9Y5P3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 AP006587.3-201ENST00000525742 1516 ntBASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAI2Q9Y5P3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI2Q9Y5P3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 AC055733.4-201ENST00000638462 1354 ntBASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.6■■□□□ 1.05
RAI2Q9Y5P3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms