Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC5Q9Y5F6 LINC01529-204ENST00000636474 1715 ntBASIC23.58■■□□□ 1.37
PCDHGC5Q9Y5F6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGC5Q9Y5F6 AC144652.1-201ENST00000609974 1624 ntBASIC23.58■■□□□ 1.36
PCDHGC5Q9Y5F6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDHGC5Q9Y5F6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGC5Q9Y5F6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 AC092053.2-201ENST00000640557 1818 ntBASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 AP004607.4-201ENST00000530158 1459 ntBASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 AC087742.1-201ENST00000575880 1738 ntBASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGC5Q9Y5F6 AC007375.3-201ENST00000600936 2314 ntBASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 AC080038.3-201ENST00000623346 1952 ntBASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC5Q9Y5F6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 C11orf96-202ENST00000528572 1834 ntBASIC23.54■■□□□ 1.36
PCDHGC5Q9Y5F6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 AC104771.1-201ENST00000603335 964 ntBASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC5Q9Y5F6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDHGC5Q9Y5F6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.52■■□□□ 1.35
PCDHGC5Q9Y5F6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC5Q9Y5F6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC5Q9Y5F6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC5Q9Y5F6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC5Q9Y5F6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms