Protein–RNA interactions for Protein: Q9ULM2

ZNF490, Zinc finger protein 490, humanhuman

Predicted RBP Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490Q9ULM2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 AL139246.5-201ENST00000606645 996 ntBASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 AL355001.2-201ENST00000620617 1191 ntBASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 AC244015.2-201ENST00000616358 1861 ntBASIC20.77■□□□□ 0.92
ZNF490Q9ULM2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF490Q9ULM2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF490Q9ULM2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 AC099791.1-201ENST00000416440 715 ntBASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 AP001330.3-201ENST00000520123 633 ntBASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 AC126544.1-201ENST00000580842 1059 ntBASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF490Q9ULM2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 AL136967.2-201ENST00000623968 743 ntBASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF490Q9ULM2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 SUDS3P1-201ENST00000505831 966 ntBASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF490Q9ULM2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 AC026471.6-201ENST00000622954 1905 ntBASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 MIR939-201ENST00000401314 82 ntBASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF490Q9ULM2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 AC027682.1-201ENST00000562846 899 ntBASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 AF213884.3-201ENST00000563833 479 ntBASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF490Q9ULM2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 IGHV3-19-201ENST00000521488 291 ntBASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF490Q9ULM2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms