Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLCF1Q9UBD9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 AC127496.7-201ENST00000625110 1798 ntBASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 AP001160.3-201ENST00000601484 763 ntBASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 AC073111.5-205ENST00000641717 521 ntBASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCF1Q9UBD9 C1orf229-201ENST00000623686 2258 ntBASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 AC138907.5-202ENST00000569484 235 ntBASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 RAP2CP1-201ENST00000605103 478 ntBASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCF1Q9UBD9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 CDCA4P2-201ENST00000441182 718 ntBASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 AC010141.2-201ENST00000452426 721 ntBASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 EEF1DP3-203ENST00000566025 782 ntBASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 C9orf163-202ENST00000624034 2573 ntBASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCF1Q9UBD9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLCF1Q9UBD9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLCF1Q9UBD9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.02■□□□□ 0.63
CLCF1Q9UBD9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLCF1Q9UBD9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 AC011767.1-201ENST00000617410 1153 ntBASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCF1Q9UBD9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 MFSD11-216ENST00000590393 1141 ntBASIC19■□□□□ 0.63
CLCF1Q9UBD9 UBE2DNL-204ENST00000602536 740 ntBASIC19■□□□□ 0.63
CLCF1Q9UBD9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms